RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FDX2Q6P4F2 183 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 SYT9Q86SS6 491 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 NAXEQ8NCW5 288 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 ST6GALNAC3Q8NDV1 305 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 OR1K1Q8NGR3 316 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 HSD17B8Q92506 261 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 TMEM203Q969S6 136 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 STARD4Q96DR4 205 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 TMED9Q9BVK6 235 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 FBXL3Q9UKT7 428 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 BOD1L1Q8NFC6 3051 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 ARHGAP21Q5T5U3 1957 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 LOC100506127A0A0U1RQW1 187 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 IL18BPO95998 194 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 CGAP01215 116 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 ZNF32P17041 273 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 ELFN2Q5R3F8 820 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 ZNF544Q6NX49 715 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 GDPGP1Q6ZNW5 385 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 Q6ZT83 130 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 OR2G2Q8NGZ5 317 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 PGLYRP3Q96LB9 341 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 CNTNAP3BQ96NU0 1288 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 CNTNAP3Q9BZ76 1288 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 EXOSC4Q9NPD3 245 aaKnown RBP18.3■□□□□ 0.52
SND1-214ENST00000489417 DDX28Q9NUL7 540 aaKnown RBP18.3■□□□□ 0.52
SND1-214ENST00000489417 SSR3Q9UNL2 185 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 R4GMQ9 66 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 DOCK7Q96N67 2140 aa18.3■□□□□ 0.52
SND1-214ENST00000489417 ZZEF1O43149 2961 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 DSPP15924 2871 aaKnown RBP18.29■□□□□ 0.52
SND1-214ENST00000489417 GTF3C1Q12789 2109 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 A0A096LPE4 126 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 A0A1W2PPZ6 126 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 GPRIN2O60269 458 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 ATE1O95260 518 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 CTSSP25774 331 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 DCTDP32321 178 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 GRB2P62993 217 aaKnown RBP18.29■□□□□ 0.52
SND1-214ENST00000489417 RAB35Q15286 201 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 TRAM1Q15629 374 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 ZNF829Q3KNS6 432 aaPredicted RBP18.29■□□□□ 0.52
SND1-214ENST00000489417 ANKRD16Q6P6B7 361 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 FGFBP3Q8TAT2 258 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 GHSRQ92847 366 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 C4orf45Q96LM5 186 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 ATF6BQ99941 703 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 SFXN3Q9BWM7 321 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 NIPAL2Q9H841 368 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 FRRS1LQ9P0K9 344 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 SH3BGRL2Q9UJC5 107 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 TIMM10BQ9Y5J6 103 aa18.29■□□□□ 0.52
SND1-214ENST00000489417 PHF3Q92576 2039 aaKnown RBP18.29■□□□□ 0.52
SND1-214ENST00000489417 SLC22A1O15245 554 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 SGCEO43556 437 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 SRSF10O75494 262 aaKnown RBP18.28■□□□□ 0.52
SND1-214ENST00000489417 PNPP00491 289 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 HLA-DPB1P04440 258 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 PATE4P0C8F1 98 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 IGHV1-2P23083 117 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 HSD11B1P28845 292 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 VBP1P61758 197 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 NCS1P62166 190 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 FABP5Q01469 135 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 MFGE8Q08431 387 aaPredicted RBP18.28■□□□□ 0.52
SND1-214ENST00000489417 PMPCAQ10713 525 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 NFATC3Q12968 1075 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 SLC36A2Q495M3 483 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 SOWAHCQ53LP3 525 aaPredicted RBP18.28■□□□□ 0.52
SND1-214ENST00000489417 CD200R1LQ6Q8B3 271 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 BCL2L2Q92843 193 aaPredicted RBP18.28■□□□□ 0.52
SND1-214ENST00000489417 TRMT61AQ96FX7 289 aaKnown RBP18.28■□□□□ 0.52
SND1-214ENST00000489417 CENPOQ9BU64 300 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 OR2H1Q9GZK4 316 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 HDHD2Q9H0R4 259 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 PLEK2Q9NYT0 353 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 SLC5A6Q9Y289 635 aa18.28■□□□□ 0.52
SND1-214ENST00000489417 TRDV1A0A1B0GX56 115 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 LOC110117498-PIK3R3F6TDL0 507 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 DOK2O60496 412 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 RGS9O75916 674 aaPredicted RBP18.27■□□□□ 0.52
SND1-214ENST00000489417 MMP7P09237 267 aaPredicted RBP18.27■□□□□ 0.52
SND1-214ENST00000489417 CD8BP10966 210 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 KIR3DL2P43630 455 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 CCR9P51686 369 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 TGFBR3Q03167 851 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 SPCS2Q15005 226 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 ST3GAL2Q16842 350 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 WDR38Q5JTN6 314 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 CATSPERDQ86XM0 798 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 PRSS35Q8N3Z0 413 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 MS4A15Q8N5U1 240 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 ZNF610Q8N9Z0 462 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 COQ7Q99807 217 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 PDCD1LG2Q9BQ51 273 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 WNT5BQ9H1J7 359 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 OPN3Q9H1Y3 402 aaPredicted RBP18.27■□□□□ 0.52
SND1-214ENST00000489417 ZNF224Q9NZL3 707 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 GTF2A1LQ9UNN4 478 aa18.27■□□□□ 0.52
SND1-214ENST00000489417 TLN1Q9Y490 2541 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms