RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 BLVRAP53004 296 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 UCP2P55851 309 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 CORO6Q6QEF8 472 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 RFPL4BQ6ZWI9 263 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 LINC00346Q8IVM7 164 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 ZNF511Q8NB15 262 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 OR10H5Q8NGA6 315 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 OR1F12Q8NHA8 337 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 MAP6Q96JE9 813 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 CACNG6Q9BXT2 260 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 MRPL37Q9BZE1 423 aaKnown RBP16.04■□□□□ 0.16
PTCD3-217ENST00000488801 BCL2L14Q9BZR8 327 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 WDR76Q9H967 626 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 PLEK2Q9NYT0 353 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 POLR1DQ9Y2S0 133 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
PTCD3-217ENST00000488801 TEP1Q99973 2627 aaKnown RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 C5orf49A4QMS7 147 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 TVP23AA6NH52 213 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PRR23D1E9PI22 279 aaPredicted RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PRKYO43930 277 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 FAM157BP0CG42 384 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PRR23D2P0DMB1 279 aaPredicted RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 ZNF250P15622 560 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PAICSP22234 425 aaKnown RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 FMO3P31513 532 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 POLR2IP36954 125 aaKnown RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 ENTPD1P49961 510 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PPOXP50336 477 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 ERVS71-1P61550 626 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 RSPO1Q2MKA7 263 aaPredicted RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 ELFN2Q5R3F8 820 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PLBD1Q6P4A8 553 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 VHLLQ6RSH7 139 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 PRSS57Q6UWY2 283 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 CPOQ8IVL8 374 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 TIGD4Q8IY51 512 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 BBS1Q8NFJ9 593 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 DOK1Q99704 481 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 DDX28Q9NUL7 540 aaKnown RBP16.03■□□□□ 0.16
PTCD3-217ENST00000488801 ITGB1BP2Q9UKP3 347 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 CMAHPQ9Y471 501 aa16.03■□□□□ 0.16
PTCD3-217ENST00000488801 CCDC182A6NF36 153 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 ANKRD65E5RJM6 399 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 IGHV4-39P01824 125 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 HLA-DQA2P01906 255 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 OTX1P32242 354 aaPredicted RBP16.02■□□□□ 0.16
PTCD3-217ENST00000488801 RPS27P42677 84 aaKnown RBP16.02■□□□□ 0.16
PTCD3-217ENST00000488801 RAD52P43351 418 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 ADAM8P78325 824 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 SNAPC1Q16533 368 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 TMEM255AQ5JRV8 349 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 SLC35D3Q5M8T2 416 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 DNM1P46Q6ZS02 220 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 CXXC5Q7LFL8 322 aaKnown RBP16.02■□□□□ 0.16
PTCD3-217ENST00000488801 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.02■□□□□ 0.16
PTCD3-217ENST00000488801 CBR4Q8N4T8 237 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 OR6K6Q8NGW6 343 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 ST7LQ8TDW4 575 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 SLC7A6Q92536 515 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 PERPQ96FX8 193 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 DCLRE1CQ96SD1 692 aaKnown RBP16.02■□□□□ 0.16
PTCD3-217ENST00000488801 C9orf16Q9BUW7 83 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 TEX12Q9BXU0 123 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 PRRG3Q9BZD7 231 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 TVP23BQ9NYZ1 205 aa16.02■□□□□ 0.16
PTCD3-217ENST00000488801 ZANQ9Y493 2812 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 H3BSA7 217 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 J3QW42 95 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 M0R129 80 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 ZNF823P16415 610 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 SNRPD2P62316 118 aaKnown RBP16.01■□□□□ 0.15
PTCD3-217ENST00000488801 Q5PR19 223 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 SHEQ5VZ18 495 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 RGS7BPQ6MZT1 257 aaPredicted RBP16.01■□□□□ 0.15
PTCD3-217ENST00000488801 C1orf174Q8IYL3 243 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 STMN2Q93045 179 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 MARS2Q96GW9 593 aaKnown RBP16.01■□□□□ 0.15
PTCD3-217ENST00000488801 C4orf45Q96LM5 186 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 SLC29A1Q99808 456 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 MYEF2Q9P2K5 600 aaKnown RBP16.01■□□□□ 0.15
PTCD3-217ENST00000488801 FBXO9Q9UK97 447 aaPredicted RBP16.01■□□□□ 0.15
PTCD3-217ENST00000488801 ABCA2Q9BZC7 2435 aa16.01■□□□□ 0.15
PTCD3-217ENST00000488801 NDUFS7O75251 213 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 NGFP01138 241 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 DBHP09172 617 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 GSTT1P30711 240 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 ATP5J2P56134 94 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 AADACL4Q5VUY2 407 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 COLCA1Q6ZS62 124 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 LRP11Q86VZ4 500 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 TMEM163Q8TC26 289 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 IPCEF1Q8WWN9 437 aaPredicted RBP16■□□□□ 0.15
PTCD3-217ENST00000488801 TRMT61AQ96FX7 289 aaKnown RBP16■□□□□ 0.15
PTCD3-217ENST00000488801 PLEKHA8Q96JA3 519 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 HRASLS5Q96KN8 279 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 INTS14Q96SY0 518 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 ATF6BQ99941 703 aa16■□□□□ 0.15
PTCD3-217ENST00000488801 CCNOP22674 350 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms