RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 TMEM154Q6P9G4 183 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 TMEM179BQ7Z7N9 219 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 PARP8Q8N3A8 854 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 OR6K6Q8NGW6 343 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 OR4Q3Q8NH05 313 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 OR1F12Q8NHA8 337 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 FAM168AQ92567 244 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 PITX2Q99697 317 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 DOK1Q99704 481 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 KRT84Q9NSB2 600 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 FZR1Q9UM11 496 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 GRIP1Q9Y3R0 1128 aa11.09□□□□□ -0.63
PHF1-210ENST00000488767 PRR23D1E9PI22 279 aaPredicted RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 J3QW42 95 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 NDUFS8O00217 210 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 RER1O15258 196 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 ICMTO60725 284 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 IGFBP1P08833 259 aaPredicted RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 PRR23D2P0DMB1 279 aaPredicted RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 ZNF250P15622 560 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 SLC25A16P16260 332 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 PYCR1P32322 319 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 PPP1CBP62140 327 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 TNK1Q13470 666 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 MEP1BQ16820 701 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 ZMAT1Q5H9K5 638 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 ELFN2Q5R3F8 820 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 ZNF362Q5T0B9 420 aaPredicted RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 FAHD1Q6P587 224 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 HS3ST5Q8IZT8 346 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 OR5L1Q8NGL2 311 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 OR9Q1Q8NGQ5 310 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 CENPNQ96H22 339 aaPredicted RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 SORCS2Q96PQ0 1159 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 COQ7Q99807 217 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 PIMREGQ9BSJ6 248 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 RBM4Q9BWF3 364 aaKnown RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 CYSLTR2Q9NS75 346 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 TBCCD1Q9NVR7 557 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 TAAR3PQ9P1P4 343 aa11.08□□□□□ -0.64
PHF1-210ENST00000488767 CGGBP1Q9UFW8 167 aaPredicted RBP11.08□□□□□ -0.64
PHF1-210ENST00000488767 GPANK1O95872 356 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 TFP02787 698 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 SPARCP09486 303 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 SPI1P17947 270 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 LIPAP38571 399 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 WNT5AP41221 380 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 ALDH3B1P43353 468 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 ESRRGP62508 458 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 GABPB1Q06547 395 aaPredicted RBP11.07□□□□□ -0.64
PHF1-210ENST00000488767 TAF13Q15543 124 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 PCGF3Q3KNV8 242 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 CORO6Q6QEF8 472 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 ZNF101Q8IZC7 436 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 ZNF525Q8N782 197 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 OR51L1Q8NGJ5 315 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 LRTOMTQ8WZ04 291 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 ATF6BQ99941 703 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 REG4Q9BYZ8 158 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 TPK1Q9H3S4 243 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 HINT3Q9NQE9 182 aaKnown RBP11.07□□□□□ -0.64
PHF1-210ENST00000488767 DLL4Q9NR61 685 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 CYB5R1Q9UHQ9 305 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 ORC6Q9Y5N6 252 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 LHFPL6Q9Y693 200 aa11.07□□□□□ -0.64
PHF1-210ENST00000488767 TEP1Q99973 2627 aaKnown RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 IGLV3-9A0A075B6K5 115 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 LOC390937A0A1W2PQ73 354 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 TMEM129A0AVI4 362 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 TVP23AA6NH52 213 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 TPD52L2O43399 206 aaKnown RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 DAOP14920 347 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 ENTPD1P49961 510 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 CRISP1P54107 249 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 ERVS71-1P61550 626 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 RPS7P62081 194 aaKnown RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 CDK5Q00535 292 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 MALLQ13021 153 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 KPNB1Q14974 876 aaKnown RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 MAD2L1BPQ15013 274 aaPredicted RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 CCDC92Q53HC0 331 aaPredicted RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 MBNL2Q5VZF2 373 aaKnown RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 OTPQ5XKR4 325 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 SLC18B1Q6NT16 456 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 RFPL4BQ6ZWI9 263 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 AMIGO2Q86SJ2 522 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 LRP11Q86VZ4 500 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 LINC00346Q8IVM7 164 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 SLC25A40Q8TBP6 338 aa11.06□□□□□ -0.64
PHF1-210ENST00000488767 KLF14Q8TD94 323 aaPredicted RBP11.06□□□□□ -0.64
PHF1-210ENST00000488767 PYDC1Q8WXC3 89 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms