RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RPS27P42677 84 aaKnown RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 ECH1Q13011 328 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 SNTB2Q13425 540 aaKnown RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 EIF2B1Q14232 305 aaKnown RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 CCDC92Q53HC0 331 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 TEX30Q5JUR7 227 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 LINC01590Q5TEZ4 76 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 SLC18B1Q6NT16 456 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 B3GLCTQ6Y288 498 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 VASH1Q7L8A9 365 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 DCXRQ7Z4W1 244 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 BCDIN3DQ7Z5W3 292 aaKnown RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF611Q8N823 705 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 NUP37Q8NFH4 326 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 LILRB1Q8NHL6 650 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 NINJ1Q92982 152 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 HDHD2Q9H0R4 259 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 OR51B6Q9H340 312 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 CENPMQ9NSP4 180 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 RRP15Q9Y3B9 282 aaKnown RBP13.62□□□□□ -0.23
C9orf3-219ENST00000488186 GRIP1Q9Y3R0 1128 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 CSMD1Q96PZ7 3565 aa13.62□□□□□ -0.23
C9orf3-219ENST00000488186 PLCE1Q9P212 2302 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 OR6C6A6NF89 314 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 SLC16A6O15403 523 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 ATP6V1G2O95670 118 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 LCKP06239 509 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 FAM157BP0CG42 384 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 SLC2A5P22732 501 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 NR4A1P22736 598 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 APOBEC3AP31941 199 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-219ENST00000488186 NAA10P41227 235 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-219ENST00000488186 RPS23P62266 143 aaKnown RBP13.61□□□□□ -0.23
C9orf3-219ENST00000488186 EFNB1P98172 346 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 RIPK1Q13546 671 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 AADACL4Q5VUY2 407 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 AGAP6Q5VW22 663 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 MEDAGQ5VYS4 303 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF544Q6NX49 715 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 DPY19L4Q7Z388 723 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 THEM6Q8WUY1 208 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 NRGNQ92686 78 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 POM121L2Q96KW2 1035 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 Q96MT0 163 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 COQ7Q99807 217 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 ATF6BQ99941 703 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 ELOVL3Q9HB03 270 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 CA10Q9NS85 328 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 DNAJC27Q9NZQ0 273 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 WARS2Q9UGM6 360 aaKnown RBP13.61□□□□□ -0.23
C9orf3-219ENST00000488186 CMAHPQ9Y471 501 aa13.61□□□□□ -0.23
C9orf3-219ENST00000488186 LOC100509620A0A075B734 347 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SYNGR3O43761 229 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SELENOFO60613 162 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 ABHD16AO95870 558 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 RAF1P04049 648 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 MRPL3P09001 348 aaKnown RBP13.6□□□□□ -0.23
C9orf3-219ENST00000488186 PCSK6P29122 969 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 THBS4P35443 961 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 UCP2P55851 309 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SELENOVP59797 346 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SNRPGP62308 76 aaKnown RBP13.6□□□□□ -0.23
C9orf3-219ENST00000488186 HIST1H3AP68431 136 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 IL5RAQ01344 420 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 HGFACQ04756 655 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 HIST2H3PS2Q5TEC6 136 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 CFAP77Q6ZQR2 320 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 HIST2H3AQ71DI3 136 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SLC16A9Q7RTY1 509 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 TIGD4Q8IY51 512 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 MUC15Q8N387 334 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF454Q8N9F8 522 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 TMEM171Q8WVE6 324 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 UBE2FQ969M7 185 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SPTSSAQ969W0 71 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 C4orf45Q96LM5 186 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 ZNF582Q96NG8 517 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-219ENST00000488186 CNN2Q99439 309 aaKnown RBP13.6□□□□□ -0.23
C9orf3-219ENST00000488186 CCL19Q99731 98 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 COPS4Q9BT78 406 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 LIME1Q9H400 295 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 MARCH7Q9H992 704 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 CLN6Q9NWW5 311 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 ATPIF1Q9UII2 106 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 ST6GALNAC2Q9UJ37 374 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 LAMP5Q9UJQ1 280 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 LAMP3Q9UQV4 416 aa13.6□□□□□ -0.23
C9orf3-219ENST00000488186 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-219ENST00000488186 F5H5K5 113 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 LYNP07948 512 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 BMP4P12644 408 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 HTR1FP30939 366 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 TTKP33981 857 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 GLRXP35754 106 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 SERPINF1P36955 418 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 SLC15A1P46059 708 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 NUDT6P53370 316 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 TPTEP56180 551 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms