RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 SAXO1Q8IYX7 474 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 C4orf33Q8N1A6 199 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 UMODL1-AS1Q8N2C9 162 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 MTURNQ8N3F0 131 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 GPATCH11Q8N954 259 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 OR51S1Q8NGJ8 323 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 BRSK1Q8TDC3 778 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 TCTEX1D2Q8WW35 142 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 PIGCQ92535 297 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 FGF13Q92913 245 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 SMARCD2Q92925 531 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.38□□□□□ -2.03
LINC00888-204ENST00000487386 OTUB2Q96DC9 234 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 LRRC39Q96DD0 335 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 DNAJC1Q96KC8 554 aaKnown RBP2.38□□□□□ -2.03
LINC00888-204ENST00000487386 ATP6V1G3Q96LB4 118 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 C12orf66Q96MD2 445 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 TSNARE1Q96NA8 513 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 XPO6Q96QU8 1125 aaKnown RBP2.38□□□□□ -2.03
LINC00888-204ENST00000487386 KCNA7Q96RP8 456 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 SELENOIQ9C0D9 397 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 IL22Q9GZX6 179 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 FAM107BQ9H098 131 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 NSRP1Q9H0G5 558 aaKnown RBP2.38□□□□□ -2.03
LINC00888-204ENST00000487386 RHBGQ9H310 441 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 WDR76Q9H967 626 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 C20orf96Q9NUD7 363 aaPredicted RBP2.38□□□□□ -2.03
LINC00888-204ENST00000487386 NUDT15Q9NV35 164 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 TREM2Q9NZC2 230 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 BFARQ9NZS9 450 aa2.38□□□□□ -2.03
LINC00888-204ENST00000487386 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 IGKV1D-8A0A087WSZ0 117 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 A0A096LNJ9 63 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 C1orf232A0A0U1RR37 186 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 IQANK1A0A1B0GTG1 560 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 A0A1W2PNV4 684 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 TMEM120BA0PK00 339 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 OR51F1A6NGY5 319 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 GOLGA8TH3BQL2 631 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 GOLGA8RI6L899 631 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 K7ERQ8 282 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 AP3B1O00203 1094 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 KPNA3O00505 521 aaPredicted RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 ATP8B1O43520 1251 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 OR10H3O60404 316 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 AGTP01019 485 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 APODP05090 189 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CHTF8P0CG12 524 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 NEFHP12036 1026 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 MLNP12872 115 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 HLA-EP13747 358 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 HOXB8P17481 243 aaPredicted RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 MAGP20916 626 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 HNRNPA2B1P22626 353 aaKnown RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 IVDP26440 423 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 HTR2AP28223 471 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 PBLDP30039 288 aaPredicted RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 GDI1P31150 447 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 SPAM1P38567 509 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 PTGDSP41222 190 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 SLC1A2P43004 574 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 MAGEA3P43357 314 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CD151P48509 253 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 ACADVLP49748 655 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CCR6P51684 374 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 KPNA2P52292 529 aaKnown RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 ZNF140P52738 457 aaPredicted RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 GPX6P59796 221 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 GMFBP60983 142 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 MAGOHP61326 146 aaKnown RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 RPS14P62263 151 aaKnown RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CBX1P83916 185 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CDK16Q00536 496 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 TGFBR3Q03167 851 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 RAD51Q06609 339 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 HTR4Q13639 388 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 NSUN5P1Q3KNT7 163 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 SPANXN3Q5MJ09 141 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 C1orf100Q5SVJ3 147 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 ARMC12Q5T9G4 340 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 STEAP4Q687X5 459 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 PDPK2PQ6A1A2 396 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 TTC19Q6DKK2 380 aaPredicted RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 KDELC1Q6UW63 502 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CES3Q6UWW8 571 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 FAM151BQ6UXP7 276 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 PRSS41Q7RTY9 318 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 CMC1Q7Z7K0 106 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 ZNF540Q8NDQ6 660 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 DENND6BQ8NEG7 585 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 OR10A7Q8NGE5 316 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 OR51G1Q8NGK1 321 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 OR5L2Q8NGL0 311 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 OR13C4Q8NGS5 318 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 TMA16Q96EY4 203 aaKnown RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 IMP4Q96G21 291 aaKnown RBP2.37□□□□□ -2.03
LINC00888-204ENST00000487386 PKNOX2Q96KN3 472 aa2.37□□□□□ -2.03
LINC00888-204ENST00000487386 TSGA13Q96PP4 275 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms