RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 TIMD4Q96H15 378 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 HIST1H2AAQ96QV6 131 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 SEPHS2Q99611 448 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 TAAR3PQ9P1P4 343 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 SLC17A7Q9P2U7 560 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 DNAJB11Q9UBS4 358 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 KLHL21Q9UJP4 597 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 NUP50Q9UKX7 468 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 POFUT2Q9Y2G5 429 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 RAP2CQ9Y3L5 183 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 SNX13Q9Y5W8 968 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 GMEB1Q9Y692 573 aa4.28□□□□□ -1.72
R3HDM1-218ENST00000487294 NBEAL2Q6ZNJ1 2754 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ARHGAP32A7KAX9 2087 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 A0A0B4J2E0 115 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 A0A1B0GWA3 101 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 A0A1B0GX12 115 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CENPBD1B2RD01 187 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 H3BSA7 217 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PLPP3O14495 311 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TM9SF1O15321 606 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 BIRC5O15392 142 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SEC14L2O76054 403 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CLPTM1O96005 669 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 MT-ATP6P00846 226 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PTHP01270 115 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 IGHMP01871 453 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 BGLAPP02818 100 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 IL6P05231 212 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ANXA2P07355 339 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CD55P08174 381 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 MMP7P09237 267 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ALDOCP09972 364 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CD79AP11912 226 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 HLA-DOBP13765 273 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ETFAP13804 333 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 B4GALT1P15291 398 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF12P17014 697 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 LBPP18428 481 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 NCF2P19878 526 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 IL12AP29459 219 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CAPZA2P47755 286 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 RPL14P50914 215 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 MMP15P51511 669 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 AQP5P55064 265 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 DSTNP60981 165 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 RPL15P61313 204 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 UFM1P61960 85 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PAX2Q02962 417 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PAX8Q06710 450 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PUDPQ08623 228 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF154Q13106 437 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 FADDQ13158 208 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PMS2P3Q13401 168 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 HIST3H3Q16695 136 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM155Q4W5P6 130 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ALG10BQ5I7T1 473 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 AVPI1Q5T686 147 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 LEG1Q6P5S2 330 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 WDR88Q6ZMY6 472 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF621Q6ZSS3 439 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 WDFY1Q8IWB7 410 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC22A24Q8N4F4 322 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 PAQR4Q8N4S7 273 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF781Q8N8C0 355 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC30A7Q8NEW0 376 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 OR1J2Q8NGS2 313 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 OR6X1Q8NH79 312 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 KIF18AQ8NI77 898 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 FGFBP3Q8TAT2 258 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ANP32BQ92688 251 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM54Q969K7 222 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ELMOD3Q96FG2 381 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC47A1Q96FL8 570 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM19Q96HH6 336 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TXNDC15Q96J42 360 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 C16orf45Q96MC5 204 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TSPAN32Q96QS1 320 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 OR52E6Q96RD3 313 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SORT1Q99523 831 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 EPYCQ99645 322 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CITED1Q99966 193 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 RHOXF2Q9BQY4 288 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TMEM43Q9BTV4 400 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ULBP2Q9BZM5 246 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ROPN1BQ9BZX4 212 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 C20orf27Q9GZN8 174 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 MMP27Q9H306 513 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 EVA1AQ9H8M9 152 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 MEAF6Q9HAF1 191 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SAP30LQ9HAJ7 183 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 ROPN1Q9HAT0 212 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 TPT1P8Q9HAU6 139 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 A4GALTQ9NPC4 353 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 CYSLTR2Q9NS75 346 aa4.27□□□□□ -1.73
R3HDM1-218ENST00000487294 SLC6A13Q9NSD5 602 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms