RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 HLA-DPB1P04440 258 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 SERPINE2P07093 398 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 FGF4P08620 206 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 TLX1NBP0CAT3 122 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 OR5H8P0DN80 308 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ANXA8P13928 327 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 STOMP27105 288 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 NAMPTP43490 491 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 RPS9P46781 194 aaKnown RBP2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 CSNK1A1P48729 337 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 RAB9AP51151 201 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 RND2P52198 227 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF138P52744 262 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 CRISP1P54107 249 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 SP4Q02446 784 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 IL18Q14116 193 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 TRAM2Q15035 370 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF726P1Q15940 193 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 UBE2SQ16763 222 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ANXA8L1Q5VT79 327 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 HHATQ5VTY9 493 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 MBOAT1Q6ZNC8 495 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 NCCRP1Q6ZVX7 275 aaPredicted RBP2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 IQCF2Q8IXL9 164 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 DRAXINQ8NBI3 349 aaPredicted RBP2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 LYPD6BQ8NI32 183 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 PPP1R14BQ96C90 147 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ECHDC3Q96DC8 303 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 XPO6Q96QU8 1125 aaKnown RBP2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 OR2A5Q96R48 311 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 MICU1Q9BPX6 476 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 BPIFA3Q9BQP9 254 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 CENPHQ9H3R5 247 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 AUNIPQ9H7T9 357 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 C20orf96Q9NUD7 363 aaPredicted RBP2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 FAM49BQ9NUQ9 324 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 PTTG3PQ9NZH4 202 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 PSG11Q9UQ72 335 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 ABCA5Q8WWZ7 1642 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 CCNB3Q8WWL7 1395 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 MAP3K5Q99683 1374 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 NCOA2Q15596 1464 aa2.19□□□□□ -2.06
SNRNP27-204ENST00000487029 KBTBD11-OT1A0A1B0GTJ5 212 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 SMKR1H3BMG3 65 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CASQ2O14958 399 aaPredicted RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 MAGEB4O15481 346 aaPredicted RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 AIREO43918 545 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 DNAJB6O75190 326 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 MED6O75586 246 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 SLC25A14O95258 325 aaPredicted RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 FGFR1OPO95684 399 aaKnown RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CT45A6P0DMU7 189 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CT45A5P0DMU8 189 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CT45A7P0DMV0 189 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 SFTPCP11686 197 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ZNF823P16415 610 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 WARSP23381 471 aaKnown RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 HMOX2P30519 316 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ATP5OP48047 213 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ARG2P78540 354 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 QPRTQ15274 297 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 PSMD5Q16401 504 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 XKR4Q5GH76 650 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TFDP3Q5H9I0 405 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CT45A1Q5HYN5 189 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 UBE2UQ5VVX9 321 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TTC19Q6DKK2 380 aaPredicted RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TWF2Q6IBS0 349 aaKnown RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TMEM53Q6P2H8 277 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 DNAJC24Q6P3W2 148 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 C16orf87Q6PH81 154 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ARL9Q6T311 187 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ITPRIPQ8IWB1 547 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 OFCC1Q8IZS5 231 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CYB561D1Q8N8Q1 229 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 C15orf56Q8N910 161 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TTC29Q8NA56 475 aaPredicted RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CT45A3Q8NHU0 189 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 NUBPLQ8TB37 319 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ABHD3Q8WU67 409 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 EEF1AKMT3Q96AZ1 226 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 GALNT14Q96FL9 552 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 PRRC1Q96M27 445 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 FOPNLQ96NB1 174 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TRIM4Q9C037 500 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ACTR3CQ9C0K3 210 aaPredicted RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 NTN4Q9HB63 628 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 TMEM9BQ9NQ34 198 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 CLN8Q9UBY8 286 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 PAIP2BQ9ULR5 123 aaKnown RBP2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ATP6V1DQ9Y5K8 247 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 ANKRD36BQ8N2N9 1353 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 NACAE9PAV3 2078 aa2.18□□□□□ -2.06
SNRNP27-204ENST00000487029 PTPRGP23470 1445 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 KIF21BO75037 1637 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 A0A1B0GVX0 72 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 H0YC42 278 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 H7C0C1 242 aa2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 LIN7AO14910 233 aaPredicted RBP2.17□□□□□ -2.06
SNRNP27-204ENST00000487029 ENTPD5O75356 428 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms