RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 EMC6Q9BV81 110 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 APMAPQ9HDC9 416 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 CGGBP1Q9UFW8 167 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 PISDQ9UG56 409 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 LOC390937A0A1W2PQ73 354 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 SULT1C2O00338 296 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 DLL1O00548 723 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 DOK2O60496 412 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 GIPP09681 153 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 HOXA6P31267 233 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 ZNF81P51508 661 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 MMP16P51512 607 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 GPR85P60893 370 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 C19orf57Q0VDD7 668 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 SLC36A1Q7Z2H8 476 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 ADGRE4PQ86SQ3 457 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 C1orf210Q8IVY1 113 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 ADPRHL1Q8NDY3 354 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 OR10H5Q8NGA6 315 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 OR4D10Q8NGI6 311 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 OR6N1Q8NGY5 312 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 RBP7Q96R05 134 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 MRPL13Q9BYD1 178 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 CA10Q9NS85 328 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 CENPMQ9NSP4 180 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 PIPOXQ9P0Z9 390 aa16.04■□□□□ 0.16
PDLIM7-207ENST00000486828 VPS13AQ96RL7 3174 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 DCDC2BA2VCK2 349 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 LDLRAD4O15165 306 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 LAMTOR5O43504 91 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 TOXO94900 526 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 CYC1P08574 325 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 VSIG10L2P0DP72 767 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 ACTBP60709 375 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 PSMA6P60900 246 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 ACTG1P63261 375 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 SPOCK1Q08629 439 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 CSRP2Q16527 193 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 C3orf33Q6P1S2 294 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 FAM109AQ8N4B1 249 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 NKAIN3Q8N8D7 197 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 CLEC1AQ8NC01 280 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 OR2M3Q8NG83 312 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 CHIAQ9BZP6 476 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 FAM206AQ9NX38 181 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 CACNA1EQ15878 2313 aa16.03■□□□□ 0.16
PDLIM7-207ENST00000486828 LOC101059948A0A1B0GTJ6 334 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 MEIS3P1A6NDR6 274 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 P2RY10O00398 339 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 LMX1BO60663 402 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 NOS1APO75052 506 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 SLC22A5O76082 557 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 IKZF1Q13422 519 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 CLPPQ16740 277 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 HLA-BQ31612 363 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 FAM198BQ6UWH4 519 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 LYPD6Q86Y78 171 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 UEVLDQ8IX04 471 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 FTMTQ8N4E7 242 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 NAT6Q93015 286 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 SLAMF6Q96DU3 332 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 CYB5R1Q9UHQ9 305 aa16.02■□□□□ 0.16
PDLIM7-207ENST00000486828 A0A0A6YYH2 397 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 A6NJ64 397 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 MEN1O00255 615 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 EIF1AYO14602 144 aaKnown RBP16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 DKK1O94907 266 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 OR2A4O95047 310 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 CD3DP04234 171 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 LPLP06858 475 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 TDGF1P13385 188 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 LAP3P28838 519 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 SSTR2P30874 369 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 P2RY4P51582 365 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 THEM4Q5T1C6 240 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 STEAP1BQ6NZ63 245 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 ZNF627Q7L945 461 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 MAML2Q8IZL2 1156 aaPredicted RBP16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 JAGN1Q8N5M9 183 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 DTWD2Q8NBA8 298 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 OR51S1Q8NGJ8 323 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 PTX4Q96A99 478 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 FOXRED1Q96CU9 486 aaPredicted RBP16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 SPACA9Q96E40 222 aaPredicted RBP16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 SEH1LQ96EE3 360 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 OR2A7Q96R45 310 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 RASL10BQ96S79 203 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 DEFB126Q9BYW3 111 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 SCPEP1Q9HB40 452 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 OCIAD1Q9NX40 245 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.15
PDLIM7-207ENST00000486828 OR2M5A3KFT3 312 aa16.01■□□□□ 0.15
PDLIM7-207ENST00000486828 ACSM4P0C7M7 580 aa16.01■□□□□ 0.15
PDLIM7-207ENST00000486828 RAP2BP61225 183 aa16.01■□□□□ 0.15
PDLIM7-207ENST00000486828 TSPAN5P62079 268 aa16.01■□□□□ 0.15
PDLIM7-207ENST00000486828 DHODHQ02127 395 aa16.01■□□□□ 0.15
PDLIM7-207ENST00000486828 INPP5JQ15735 1006 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms