RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PHBP35232 272 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 HOXA1P49639 335 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 PPT1P50897 306 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 TAS2R39P59534 338 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 GNG2P59768 71 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 PSME3P61289 254 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 PLCXD2Q0VAA5 305 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 KRTAP24-1Q3LI83 254 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 SLC25A53Q5H9E4 307 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 PRAMEF7Q5VXH5 474 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 TTC23Q5W5X9 447 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 OR52E8Q6IFG1 317 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ADAM5Q6NVV9 412 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 BHLHB9Q6PI77 547 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ERASQ7Z444 233 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 PATL1Q86TB9 770 aaKnown RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ZC3HC1Q86WB0 502 aaKnown RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 FAM219AQ8IW50 185 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ZNF100Q8IYN0 542 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 WDSUB1Q8N9V3 476 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 NOA1Q8NC60 698 aaKnown RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 BEND2Q8NDZ0 799 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 OR5D13Q8NGL4 314 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 HGDQ93099 445 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 OR5B2Q96R09 309 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 NODALQ96S42 347 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 TEAD3Q99594 435 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 RHNO1Q9BSD3 238 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 TMEM204Q9BSN7 226 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 JAM3Q9BX67 310 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 SRRQ9GZT4 340 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 NXF5Q9H1B4 397 aaKnown RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 SLCO5A1Q9H2Y9 848 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ELOVL6Q9H5J4 265 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 CCDC134Q9H6E4 229 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 MTHFD2LQ9H903 347 aaPredicted RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 GALNT9Q9HCQ5 603 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 FAIMQ9NVQ4 179 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 CCDC59Q9P031 241 aaKnown RBP5.97□□□□□ -1.45
HDAC3-209ENST00000486618 SLC17A6Q9P2U8 582 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 ZDHHC8Q9ULC8 765 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 SLC22A13Q9Y226 551 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 CMAHPQ9Y471 501 aa5.97□□□□□ -1.45
HDAC3-209ENST00000486618 A0A1W2PPQ1 181 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 A0A1W2PR48 441 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 A0A1W2PRX2 142 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 M0QZK8 103 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 OVOL3O00110 214 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 F2RL2O00254 374 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 PLPP1O14494 284 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 CTDSPLO15194 276 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 TM9SF1O15321 606 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 SLC31A2O15432 143 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 RGS10O43665 173 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 MGRN1O60291 552 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 BCAS1O75363 584 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-209ENST00000486618 PRKRAO75569 313 aaKnown RBP5.96□□□□□ -1.46
HDAC3-209ENST00000486618 REM1O75628 298 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 OR4F21O95013 312 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 H6PDO95479 791 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 AIFM1O95831 613 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 PLAUP00749 431 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 CT62P0C5K7 136 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 SLC2A1P11166 492 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 CPMP14384 443 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 LBPP18428 481 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 SDHAP31040 664 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 ACVR1BP36896 505 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 PTGDSP41222 190 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 GSSP48637 474 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 MMP15P51511 669 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 XKP51811 444 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 HMGCS1Q01581 520 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 LTB4RQ15722 352 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 IMPG1Q17R60 797 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 MTX3Q5HYI7 312 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF691Q5VV52 312 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 GRHL2Q6ISB3 625 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 RNASEKQ6P5S7 137 aaKnown RBP5.96□□□□□ -1.46
HDAC3-209ENST00000486618 ZDHHC24Q6UX98 284 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM108Q6UXF1 575 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM139Q8IV31 216 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 PDPRQ8NCN5 879 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 MARCH1Q8TCQ1 289 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 MRGPRDQ8TDS7 321 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 NEK7Q8TDX7 302 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 SCARB1Q8WTV0 552 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 UBTD2Q8WUN7 234 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 NSMAFQ92636 917 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 C20orf24Q9BUV8 137 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 ABHD6Q9BV23 337 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 C19orf24Q9BVV8 132 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 MS4A7Q9GZW8 240 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-209ENST00000486618 SHARPINQ9H0F6 387 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 SIRPDQ9H106 197 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 DDX31Q9H8H2 851 aaKnown RBP5.96□□□□□ -1.46
HDAC3-209ENST00000486618 RNF122Q9H9V4 155 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 LRTM1Q9HBL6 345 aa5.96□□□□□ -1.46
HDAC3-209ENST00000486618 OPTCQ9UBM4 332 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms