RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ECH1Q13011 328 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 GGTLC2Q14390 218 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 SLC25A30Q5SVS4 291 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 C6orf52Q5T4I8 152 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 CFAP77Q6ZQR2 320 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 VASH1Q7L8A9 365 aaPredicted RBP9.88□□□□□ -0.83
NUP50-216ENST00000486184 MYPOPQ86VE0 399 aaPredicted RBP9.88□□□□□ -0.83
NUP50-216ENST00000486184 ZNF584Q8IVC4 421 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 TIGD4Q8IY51 512 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 ZNF295-AS1Q8N0V1 137 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 CPEB3Q8NE35 698 aaKnown RBP9.88□□□□□ -0.83
NUP50-216ENST00000486184 KBTBD8Q8NFY9 601 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 OR4F15Q8NGB8 312 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 OR51G2Q8NGK0 314 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 OR1F12Q8NHA8 337 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 RHOXF1Q8NHV9 184 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 THEM6Q8WUY1 208 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 UBE2FQ969M7 185 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 ZNF75AQ96N20 296 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 ATF6BQ99941 703 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 COPS4Q9BT78 406 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 YIPF3Q9GZM5 350 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 RASSF4Q9H2L5 321 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 UBTD1Q9HAC8 227 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 CENPMQ9NSP4 180 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 ATPIF1Q9UII2 106 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 TMEM14AQ9Y6G1 99 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 HSPE1-MOB4S4R3N1 261 aa9.88□□□□□ -0.83
NUP50-216ENST00000486184 VSTM5A8MXK1 200 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 ZNF878C9JN71 531 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 ZNF670-ZNF695F2Z2N8 137 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 PHYHO14832 338 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 SYNGR3O43761 229 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 HSD11B1P28845 292 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 CALCRP30988 508 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 SLC15A1P46059 708 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 MTNR1AP48039 350 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 NUDT6P53370 316 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 RPS23P62266 143 aaKnown RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 SNTB2Q13425 540 aaKnown RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 MAD2L1BPQ15013 274 aaPredicted RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 PCK2Q16822 640 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 CCDC92Q53HC0 331 aaPredicted RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 HIST2H3PS2Q5TEC6 136 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 KRT80Q6KB66 452 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 KCTD18Q6PI47 426 aaPredicted RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 HIST2H3AQ71DI3 136 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 SPATC1Q76KD6 591 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 CDC20BQ86Y33 519 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 SLC35F2Q8IXU6 374 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 OTOSQ8NHW6 89 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 IPCEF1Q8WWN9 437 aaPredicted RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 AKAP1Q92667 903 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUP50-216ENST00000486184 TFAP2CQ92754 450 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 FBXW5Q969U6 566 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 SPTSSAQ969W0 71 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 SLAMF6Q96DU3 332 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 RNFT2Q96EX2 444 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 MNTQ99583 582 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 COQ7Q99807 217 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 TMEM204Q9BSN7 226 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 Q9H521 79 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 ELOVL3Q9HB03 270 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 FAIMQ9NVQ4 179 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 HAO2Q9NYQ3 351 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 AASSQ9UDR5 926 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 EDARQ9UNE0 448 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 RPL36Q9Y3U8 105 aaKnown RBP9.87□□□□□ -0.83
NUP50-216ENST00000486184 COL12A1Q99715 3063 aa9.87□□□□□ -0.83
NUP50-216ENST00000486184 FAM221AA4D161 298 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 SHISA9B4DS77 424 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 HS3ST1O14792 307 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 ABHD16AO95870 558 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 PLAUP00749 431 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 LCKP06239 509 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 H2BFMP0C1H6 154 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 SBK2P0C263 348 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 FAM157BP0CG42 384 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 ZNF35P13682 527 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 GABRB1P18505 474 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 LOXP28300 417 aaPredicted RBP9.86□□□□□ -0.83
NUP50-216ENST00000486184 RAD52P43351 418 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 SLC6A9P48067 706 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 RGS6P49758 472 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 TPTEP56180 551 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 GRB2P62993 217 aaKnown RBP9.86□□□□□ -0.83
NUP50-216ENST00000486184 ACTC1P68032 377 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 ACTA1P68133 377 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 ZNF672Q499Z4 452 aaPredicted RBP9.86□□□□□ -0.83
NUP50-216ENST00000486184 VHLLQ6RSH7 139 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 THAP5Q7Z6K1 395 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 KRT77Q7Z794 578 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 OR10H4Q8NGA5 316 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 CNIH3Q8TBE1 160 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 ASB17Q8WXJ9 295 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 MAP6Q96JE9 813 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 POM121L2Q96KW2 1035 aa9.86□□□□□ -0.83
NUP50-216ENST00000486184 DCLRE1CQ96SD1 692 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms