RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 GSSP48637 474 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 TMEM33P57088 247 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 LSM6P62312 80 aaKnown RBP15.05■□□□□ -0
COL6A1-204ENST00000486023 CCDC92Q53HC0 331 aaPredicted RBP15.05■□□□□ -0
COL6A1-204ENST00000486023 MTX3Q5HYI7 312 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 TMEM255AQ5JRV8 349 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 MBNL2Q5VZF2 373 aaKnown RBP15.05■□□□□ -0
COL6A1-204ENST00000486023 LCN8Q6JVE9 175 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 USP51Q70EK9 711 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 OR52L1Q8NGH7 329 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 OR1F12Q8NHA8 337 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 CCL17Q92583 94 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 MDFIQ99750 246 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 BTBD10Q9BSF8 475 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 WACQ9BTA9 647 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 REEP1Q9H902 201 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 SAP30LQ9HAJ7 183 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 TAS2R1Q9NYW7 299 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 PRPF19Q9UMS4 504 aaKnown RBP15.05■□□□□ -0
COL6A1-204ENST00000486023 STARD10Q9Y365 291 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 SAMHD1Q9Y3Z3 626 aaKnown RBP15.05■□□□□ -0
COL6A1-204ENST00000486023 CACNG2Q9Y698 323 aa15.05■□□□□ -0
COL6A1-204ENST00000486023 IGHV1-69-2A0A0G2JMI3 117 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 OR6C68A6NDL8 312 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 COX5BP10606 129 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 GSTM3P21266 225 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 TEKQ02763 1124 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.04■□□□□ -0
COL6A1-204ENST00000486023 PSG7Q13046 419 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 FAM120AOSQ5T036 256 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 ZNF620Q6ZNG0 422 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 LINC00346Q8IVM7 164 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 LINC01356Q8N9X3 169 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 CYB561A3Q8NBI2 242 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 AQP11Q8NBQ7 271 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 GJC3Q8NFK1 279 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 CLDND2Q8NHS1 167 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 BCAS4Q8TDM0 211 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 CMBLQ96DG6 245 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 MUC13Q9H3R2 512 aa15.04■□□□□ -0
COL6A1-204ENST00000486023 IGLV1-36A0A0B4J1U3 117 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 ZSCAN5BA6NJL1 495 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 ARPC3O15145 178 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 PYCR1P32322 319 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 MMP15P51511 669 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 HMGA2P52926 109 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 HNRNPA0Q13151 305 aaKnown RBP15.03■□□□□ -0
COL6A1-204ENST00000486023 HFEQ30201 348 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 OR4C15Q8NGM1 316 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 OR2AJ1Q8NGZ0 328 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 HPS1Q92902 700 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 PITX2Q99697 317 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 TRIM15Q9C019 465 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 MAGIXQ9H6Y5 334 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 TBC1D23Q9NUY8 699 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 TBCCD1Q9NVR7 557 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 VNN3Q9NY84 501 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 PTTG3PQ9NZH4 202 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 LPAR3Q9UBY5 353 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 CDH10Q9Y6N8 788 aa15.03■□□□□ -0
COL6A1-204ENST00000486023 RP2O75695 350 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 SOX14O95416 240 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 TFP02787 698 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 FAM157CP0CG43 387 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 GAAP10253 952 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 CRYBB2P43320 205 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 HLXQ14774 488 aaPredicted RBP15.02■□□□□ -0
COL6A1-204ENST00000486023 MICAQ29983 383 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 CR1LQ2VPA4 569 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 OR2T5Q6IEZ7 315 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 TRPM8Q7Z2W7 1104 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 C1orf174Q8IYL3 243 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 OR5AS1Q8N127 324 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 LINC00471Q8N535 108 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 PROKR2Q8NFJ6 384 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 OR51L1Q8NGJ5 315 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 OR2T29Q8NH02 315 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 ELMOD3Q96FG2 381 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 TSSK6Q9BXA6 273 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 PLA2G12AQ9BZM1 189 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 EGLN1Q9GZT9 426 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 CYSLTR2Q9NS75 346 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 NKIRAS2Q9NYR9 191 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 LHFPL6Q9Y693 200 aa15.02■□□□□ -0
COL6A1-204ENST00000486023 OR6C6A6NF89 314 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 TVP23AA6NH52 213 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 F5H5K5 113 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 GNGT2O14610 69 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 GYG2O15488 501 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 IDH3BO43837 385 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 UBOX5O94941 541 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 ZNF823P16415 610 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 SRD5A1P18405 259 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 HNF1AP20823 631 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 RBMXP38159 391 aaKnown RBP15.01□□□□□ -0.01
COL6A1-204ENST00000486023 RPS27P42677 84 aaKnown RBP15.01□□□□□ -0.01
COL6A1-204ENST00000486023 MAGEA2P43356 314 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 ERFP50548 548 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 MRPS11P82912 194 aaKnown RBP15.01□□□□□ -0.01
COL6A1-204ENST00000486023 KCNMB1Q16558 191 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms