RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CHRNA10Q9GZZ6 450 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 TREM2Q9NZC2 230 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 MDFICQ9P1T7 246 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 SHPKQ9UHJ6 478 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 CYB5R1Q9UHQ9 305 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 ATPIF1Q9UII2 106 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 PRG3Q9Y2Y8 225 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-214ENST00000483925 EVPLQ92817 2033 aa3.53□□□□□ -1.84
PTCD3-214ENST00000483925 MAPK8IP3Q9UPT6 1336 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ERVV-1B6SEH8 477 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ANKRD63C9JTQ0 380 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 F6UB75 175 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 NME4O00746 187 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 NUPL2O15504 423 aaKnown RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 HCRTR1O43613 425 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 CDC40O60508 579 aaKnown RBP eCLIP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 PSIP1O75475 530 aaKnown RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 OR5F1O95221 314 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 PSMG1O95456 288 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 SLC35E2P0CK97 266 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 LAMP1P11279 417 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 IGLL1P15814 213 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 GNB3P16520 340 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 CXCR2P25025 360 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 NTSP30990 170 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ACTR1BP42025 376 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 MAGEA3P43357 314 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 RPL14P50914 215 aaKnown RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 HCCSP53701 268 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ERVPABLB-1P60509 514 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 PAFAH1B2P68402 229 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 SEMG2Q02383 582 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 DYNC1I2Q13409 638 aaKnown RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ZNHIT3Q15649 155 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ADAMTSL4-AS1Q5T5F5 129 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 SDHAF4Q5VUM1 108 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 RESP18Q5W5W9 173 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 CNIH2Q6PI25 160 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 NPSR1Q6W5P4 371 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 MBOAT2Q6ZWT7 520 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF771Q7L3S4 317 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 C17orf82Q86X59 251 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF677Q86XU0 584 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 SKA3Q8IX90 412 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 LRRC34Q8IZ02 419 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 CADM2Q8N3J6 435 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 OR10G3Q8NGC4 313 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 OR10Z1Q8NGY1 313 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 AGAP11Q8TF27 550 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 SLC25A38Q96DW6 304 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF681Q96N22 645 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 ZBP1Q9H171 429 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 REEP1Q9H902 201 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.52□□□□□ -1.85
PTCD3-214ENST00000483925 Q9UF83 564 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 CES1P1Q9UKY3 287 aa3.52□□□□□ -1.85
PTCD3-214ENST00000483925 OR6C70A6NIJ9 312 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 A6NIZ1 184 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 E9PAM4 449 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 DPM1O60762 260 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 OXTP01178 125 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 HPNP05981 417 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 HOXC4P09017 264 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-214ENST00000483925 MAGP20916 626 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 HLA-DMAP28067 261 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 GNRHRP30968 328 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 EVI2BP34910 448 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 SERPINB5P36952 375 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF121P58317 390 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-214ENST00000483925 LINC01547P58512 204 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-214ENST00000483925 RAP1BP61224 184 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 DR1Q01658 176 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 MADCAM1Q13477 382 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ATP6AP1Q15904 470 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF726P1Q15940 193 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 POU2AF1Q16633 256 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 LRRC36Q1X8D7 754 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 TMEM249Q2WGJ8 235 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 PIGGQ5H8A4 983 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF506Q5JVG8 444 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 CCNJQ5T5M9 372 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 C4orf32Q8N8J7 132 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 AQP11Q8NBQ7 271 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 OR4F15Q8NGB8 312 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 LMO3Q8TAP4 145 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 VN1R17PQ8TDU5 208 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 NPRL2Q8WTW4 380 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 RNF133Q8WVZ7 376 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 APH1BQ8WW43 257 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 DNAJB3Q8WWF6 145 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 RASL10AQ92737 203 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 ARPC1AQ92747 370 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 TMEM230Q96A57 120 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 PPWD1Q96BP3 646 aaKnown RBP3.51□□□□□ -1.85
PTCD3-214ENST00000483925 FGGYQ96C11 551 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 DYNLL2Q96FJ2 89 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 RBBP8Q99708 897 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 APOL2Q9BQE5 337 aa3.51□□□□□ -1.85
PTCD3-214ENST00000483925 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms