RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 LRRC28Q86X40 367 aaPredicted RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 PARP8Q8N3A8 854 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 TSPEARQ8WU66 669 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 C10orf82Q8WW14 230 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 PRRC1Q96M27 445 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 Q96M85 177 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 ZNF583Q96ND8 569 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 DIRC2Q96SL1 478 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 TNFRSF19Q9NS68 423 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 PTTG3PQ9NZH4 202 aa11.67□□□□□ -0.54
VARS-226ENST00000483275 NDRG4Q9ULP0 352 aaKnown RBP11.67□□□□□ -0.54
VARS-226ENST00000483275 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 A8MXK9 166 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 EFCAB9A8MZ26 197 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 H0YL77 283 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 DYNC1I1O14576 645 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 CDC42EP2O14613 210 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 FFAR1O14842 300 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 SGCEO43556 437 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 CTLA4P16410 223 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 KITLGP21583 273 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 GUCA1AP43080 201 aaPredicted RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 CYLC2Q14093 348 aaPredicted RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 MIDNQ504T8 468 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 TBPL2Q6SJ96 375 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 SPATC1Q76KD6 591 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 OAFQ86UD1 273 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 NPEPL1Q8NDH3 523 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 BHLHE23Q8NDY6 225 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 OR52E2Q8NGJ4 325 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 SLC25A28Q96A46 364 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 RASD2Q96D21 266 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 SAMD8Q96LT4 415 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 POLR2J2Q9GZM3 115 aaKnown RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 NSRP1Q9H0G5 558 aaKnown RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 POLR2J3Q9H1A7 115 aaKnown RBP11.66□□□□□ -0.54
VARS-226ENST00000483275 GCM1Q9NP62 436 aa11.66□□□□□ -0.54
VARS-226ENST00000483275 A6NIZ1 184 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 TMEM178BH3BS89 294 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 RPS2P15880 293 aaKnown RBP11.65□□□□□ -0.54
VARS-226ENST00000483275 TNFRSF1AP19438 455 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 RPL4P36578 427 aaKnown RBP11.65□□□□□ -0.54
VARS-226ENST00000483275 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
VARS-226ENST00000483275 RAP1BP61224 184 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 RAP1AP62834 184 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 PAX2Q02962 417 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 ST3GAL3Q11203 375 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 PDLIM3Q53GG5 364 aaPredicted RBP11.65□□□□□ -0.54
VARS-226ENST00000483275 FAM205BPQ63HN1 556 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 OR2T2Q6IF00 324 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 CGB2Q6NT52 195 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 ARL9Q6T311 187 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 BRD3OSQ6XYD6 125 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 ZER1Q7Z7L7 766 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 ATG16L2Q8NAA4 619 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 C19orf18Q8NEA5 215 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 OR8J3Q8NGG0 315 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 SSBP3Q9BWW4 388 aaPredicted RBP11.65□□□□□ -0.54
VARS-226ENST00000483275 WDR76Q9H967 626 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 TBCCD1Q9NVR7 557 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 ASH2LQ9UBL3 628 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 IL20RAQ9UHF4 553 aa11.65□□□□□ -0.54
VARS-226ENST00000483275 POLR3KQ9Y2Y1 108 aaPredicted RBP11.65□□□□□ -0.54
VARS-226ENST00000483275 TEX13CA0A0J9YWL9 993 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 FAM220BPB1ANY3 271 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 F5H5P2 479 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 RER1O15258 196 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 KDELR2P33947 212 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 PAX8Q06710 450 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 SCRN3Q0VDG4 424 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 ZNF730Q6ZMV8 503 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 KLBQ86Z14 1044 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 OFCC1Q8IZS5 231 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 MEGF10Q96KG7 1140 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 ZNF570Q96NI8 536 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 GPA33Q99795 319 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 FNDC11Q9BVV2 318 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 IL19Q9UHD0 177 aa11.64□□□□□ -0.55
VARS-226ENST00000483275 IGHV2-70DA0A0C4DH43 119 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 OR6C6A6NF89 314 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 BBIP1A8MTZ0 92 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 MLNRO43193 412 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 HOXA3O43365 443 aaPredicted RBP11.63□□□□□ -0.55
VARS-226ENST00000483275 CCDC22O60826 627 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 ZNF682O95780 498 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 IFNA14P01570 189 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 WNT2P09544 360 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 GNB2P62879 340 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 IL13RA1P78552 427 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 PRKCDQ05655 676 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 KLF10Q13118 480 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 KRR1Q13601 381 aaKnown RBP11.63□□□□□ -0.55
VARS-226ENST00000483275 TRAM2Q15035 370 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms