RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TMEM33P57088 247 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 TEKQ02763 1124 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 SLC36A3Q495N2 470 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 CLEC12AQ5QGZ9 265 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 FAM166AQ6J272 317 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 NPEPL1Q8NDH3 523 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 GJC3Q8NFK1 279 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 OR1F12Q8NHA8 337 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 IPCEF1Q8WWN9 437 aaPredicted RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 HPS1Q92902 700 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 SLC7A6OSQ96CW6 309 aaPredicted RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 COG8Q96MW5 612 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 RPRD1BQ9NQG5 326 aaKnown RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 TUBG2Q9NRH3 451 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 CYSLTR2Q9NS75 346 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 DECR2Q9NUI1 292 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 TBCCD1Q9NVR7 557 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 CGGBP1Q9UFW8 167 aaPredicted RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 KCNS2Q9ULS6 477 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 GRIP1Q9Y3R0 1128 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 YLPM1P49750 1951 aaKnown RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 LRP5LA4QPB2 252 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 OR6C6A6NF89 314 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 DCTN6O00399 190 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 LMX1BO60663 402 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 LILRA1O75019 489 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 GASTP01350 101 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 GAAP10253 952 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 HOXB6P17509 224 aaKnown RBP11.85□□□□□ -0.51
VARS-225ENST00000482996 COL8A2P25067 703 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 MAGEB1P43366 347 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 CCL8P80075 99 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.85□□□□□ -0.51
VARS-225ENST00000482996 GK3PQ14409 553 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 ZMAT1Q5H9K5 638 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 FAM209AQ5JX71 171 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 SLC35F1Q5T1Q4 408 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 OTPQ5XKR4 325 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 ZNF770Q6IQ21 691 aaPredicted RBP11.85□□□□□ -0.51
VARS-225ENST00000482996 RASSF6Q6ZTQ3 369 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 OR6V1Q8N148 313 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 AQP11Q8NBQ7 271 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 SDR9C7Q8NEX9 313 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 OR52E2Q8NGJ4 325 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 MSI2Q96DH6 328 aaKnown RBP11.85□□□□□ -0.51
VARS-225ENST00000482996 DCLRE1CQ96SD1 692 aaKnown RBP11.85□□□□□ -0.51
VARS-225ENST00000482996 EGLN3Q9H6Z9 239 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 TBC1D23Q9NUY8 699 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 TMEM160Q9NX00 188 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 IL20Q9NYY1 176 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 LPAR3Q9UBY5 353 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 U3KQV3 271 aa11.85□□□□□ -0.51
VARS-225ENST00000482996 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 OR6C68A6NDL8 312 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 AQP12BA6NM10 295 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 ANKRD65E5RJM6 399 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 ACOT8O14734 319 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 RER1O15258 196 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 GSC2O15499 205 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 PPIHO43447 177 aaKnown RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 TIMM8AO60220 97 aaPredicted RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 GPANK1O95872 356 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 HLA-DQA2P01906 255 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 RGS6P49758 472 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 PPP1R8Q12972 351 aaKnown RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 TSTQ16762 297 aaKnown RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 MEP1BQ16820 701 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 MICAQ29983 383 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 ASRGL1Q7L266 308 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 ZBTB46Q86UZ6 589 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 AQP12AQ8IXF9 295 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 SLC26A10Q8NG04 563 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 YIPF5Q969M3 257 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 COQ7Q99807 217 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 CHID1Q9BWS9 393 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 CDADC1Q9BWV3 514 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 BEX2Q9BXY8 128 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 DGCR6LQ9BY27 220 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 EGLN1Q9GZT9 426 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 HDHD2Q9H0R4 259 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 SAP30LQ9HAJ7 183 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 ZNF275Q9NSD4 429 aaPredicted RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 VNN3Q9NY84 501 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
VARS-225ENST00000482996 LHFPL6Q9Y693 200 aa11.84□□□□□ -0.51
VARS-225ENST00000482996 IGHV1-69-2A0A0G2JMI3 117 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 DHRS12A0PJE2 317 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 J3QW42 95 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 BHLHE40O14503 412 aa11.83□□□□□ -0.52
VARS-225ENST00000482996 GNGT2O14610 69 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms