RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SELENOVP59797 346 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 ERVS71-1P61550 626 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 ESRRGP62508 458 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 GABPB1Q06547 395 aaPredicted RBP7.55□□□□□ -1.2
SNX4-205ENST00000482965 MSMPQ1L6U9 139 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 CCDC92Q53HC0 331 aaPredicted RBP7.55□□□□□ -1.2
SNX4-205ENST00000482965 ELFN2Q5R3F8 820 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 TMEM236Q5W0B7 351 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 KDM4DQ6B0I6 523 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 TMEM154Q6P9G4 183 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 ARL9Q6T311 187 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 OR1J1Q8NGS3 322 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 OR1F12Q8NHA8 337 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 ZNRF4Q8WWF5 429 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 Q96MF0 132 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 DOK1Q99704 481 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 VRK1Q99986 396 aaPredicted RBP7.55□□□□□ -1.2
SNX4-205ENST00000482965 SYT3Q9BQG1 590 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 PRRG3Q9BZD7 231 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 MRPL37Q9BZE1 423 aaKnown RBP7.55□□□□□ -1.2
SNX4-205ENST00000482965 NMNAT2Q9BZQ4 307 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 HDHD2Q9H0R4 259 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 OR51V1Q9H2C8 321 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 MED20Q9H944 212 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 ELOVL3Q9HB03 270 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 MRPL22Q9NWU5 206 aaKnown RBP7.55□□□□□ -1.2
SNX4-205ENST00000482965 ENOPH1Q9UHY7 261 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 OAZ3Q9UMX2 235 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
SNX4-205ENST00000482965 A0A1W2PPW3 197 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 TMEM129A0AVI4 362 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 OR6C6A6NF89 314 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 M0R233 179 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 SYNGR3O43761 229 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 SSX4O60224 188 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ERCC1P07992 297 aaPredicted RBP7.54□□□□□ -1.2
SNX4-205ENST00000482965 SPARCP09486 303 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 GCH1P30793 250 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 GGT2P36268 569 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 EVX1P49640 407 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ENTPD1P49961 510 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 PPOXP50336 477 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 KLF3P57682 345 aaPredicted RBP7.54□□□□□ -1.2
SNX4-205ENST00000482965 PPP1CBP62140 327 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 HIST1H3AP68431 136 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 PTGES3Q15185 160 aaKnown RBP7.54□□□□□ -1.2
SNX4-205ENST00000482965 SNAPC1Q16533 368 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 CLEC12BQ2HXU8 276 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ZNF718Q3SXZ3 478 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 KLHL12Q53G59 568 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 SPATA46Q5T0L3 261 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 HIST2H3PS2Q5TEC6 136 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 SLC18B1Q6NT16 456 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 PLBD1Q6P4A8 553 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 LYPD4Q6UWN0 246 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 CFAP77Q6ZQR2 320 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 RFPL4BQ6ZWI9 263 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 HIST2H3AQ71DI3 136 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 LRP11Q86VZ4 500 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 CPOQ8IVL8 374 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ZNF101Q8IZC7 436 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ABHD4Q8TB40 342 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 SYNPRQ8TBG9 265 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 SLC7A6Q92536 515 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 STMN2Q93045 179 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 C4orf45Q96LM5 186 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 DCLRE1CQ96SD1 692 aaKnown RBP7.54□□□□□ -1.2
SNX4-205ENST00000482965 PITX2Q99697 317 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 COQ7Q99807 217 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 CIB1Q99828 191 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 RBM4BQ9BQ04 359 aaKnown RBP7.54□□□□□ -1.2
SNX4-205ENST00000482965 HCAR1Q9BXC0 346 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 S100A14Q9HCY8 104 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 HINT3Q9NQE9 182 aaKnown RBP7.54□□□□□ -1.2
SNX4-205ENST00000482965 TVP23BQ9NYZ1 205 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 CYB5R1Q9UHQ9 305 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 ATPIF1Q9UII2 106 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 GRIP1Q9Y3R0 1128 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 COMMD3-BMI1R4GMX3 469 aa7.54□□□□□ -1.2
SNX4-205ENST00000482965 RNF223E7ERA6 249 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 ZNF593O00488 134 aaPredicted RBP7.53□□□□□ -1.2
SNX4-205ENST00000482965 GLCEO94923 617 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 CLPTM1O96005 669 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 NGFP01138 241 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 ADRA2AP08913 450 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 DBHP09172 617 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 CD99P14209 185 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 ZNF250P15622 560 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 GSTT1P30711 240 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 RPS27P42677 84 aaKnown RBP7.53□□□□□ -1.2
SNX4-205ENST00000482965 ALDH3B1P43353 468 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 EFNA4P52798 201 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 RPS7P62081 194 aaKnown RBP7.53□□□□□ -1.2
SNX4-205ENST00000482965 PPP2R2BQ00005 443 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 ECH1Q13011 328 aa7.53□□□□□ -1.2
SNX4-205ENST00000482965 MAD2L1BPQ15013 274 aaPredicted RBP7.53□□□□□ -1.2
SNX4-205ENST00000482965 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms