RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 UEVLDQ8IX04 471 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 DND1Q8IYX4 353 aaKnown RBP5.67□□□□□ -1.5
CLK1-212ENST00000482590 ACOT4Q8N9L9 421 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 OR1L4Q8NGR5 311 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 RHEBL1Q8TAI7 183 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 ZNF473Q8WTR7 871 aaKnown RBP5.67□□□□□ -1.5
CLK1-212ENST00000482590 TAAR8Q969N4 342 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 LGALS12Q96DT0 336 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 MTERF3Q96E29 417 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 CMTM7Q96FZ5 175 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 ZNF597Q96LX8 424 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 JSRP1Q96MG2 331 aaPredicted RBP5.67□□□□□ -1.5
CLK1-212ENST00000482590 F2RL3Q96RI0 385 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 RBBP8Q99708 897 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 MAPKAP1Q9BPZ7 522 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 RBM4BQ9BQ04 359 aaKnown RBP5.67□□□□□ -1.5
CLK1-212ENST00000482590 PELOQ9BRX2 385 aaKnown RBP5.67□□□□□ -1.5
CLK1-212ENST00000482590 NDUFAF3Q9BU61 184 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 C20orf24Q9BUV8 137 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 RBM4Q9BWF3 364 aaKnown RBP5.67□□□□□ -1.5
CLK1-212ENST00000482590 ELOVL6Q9H5J4 265 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 CAB39LQ9H9S4 337 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 PLAC1Q9HBJ0 212 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 NOX4Q9NPH5 578 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 MS4A12Q9NXJ0 267 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 NUDT4Q9NZJ9 180 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 OPTCQ9UBM4 332 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 PHF11Q9UIL8 331 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 ENPP5Q9UJA9 477 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 L3MBTL1Q9Y468 752 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 WDR45Q9Y484 360 aa5.67□□□□□ -1.5
CLK1-212ENST00000482590 NSD1Q96L73 2696 aaPredicted RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 PPIAL4CA0A0B4J2A2 164 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 GOLGA8QA0A0J9YX86 632 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 PLSCR5A0PG75 271 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 OR2M5A3KFT3 312 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 WASHC1A8K0Z3 465 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 E7ESA3 106 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 DVL1O14640 695 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 EIF3HO15372 352 aaKnown RBP eCLIP5.66□□□□□ -1.5
CLK1-212ENST00000482590 TAPBPO15533 448 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SPINT2O43291 252 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SYT7O43581 403 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 FGF17O60258 216 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SUPT3HO75486 399 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SCELO95171 688 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ETHE1O95571 254 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ANP32DO95626 131 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 TBX6O95947 436 aaPredicted RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 ANXA4P09525 319 aaPredicted RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 NPSP0C0P6 89 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 PPIAL4GP0DN37 164 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 NCK1P16333 377 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 HIST1H1TP22492 207 aaPredicted RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 IL32P24001 234 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ATP5A1P25705 553 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 IVDP26440 423 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 PIGAP37287 484 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 TMED10P49755 219 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 RAB10P61026 200 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 HERVK_113P63132 956 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ERVK-8P63133 956 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 IGLV3-21P80748 117 aaPredicted RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 PLA2G7Q13093 441 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 CALCOCO2Q13137 446 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 BIKQ13323 160 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 KPNB1Q14974 876 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 KRTAP21-3Q3LHN1 58 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 MOGAT2Q3SYC2 334 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 TMEM35AQ53FP2 167 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ARMCX4Q5H9R4 360 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 CDKL4Q5MAI5 379 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 GPR157Q5UAW9 335 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 LIPJQ5W064 366 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SLC22A10Q63ZE4 541 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 RTL6Q6ICC9 239 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 OR2A2Q6IF42 318 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 MED27Q6P2C8 311 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 BCDIN3DQ7Z5W3 292 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 OR4N5Q8IXE1 308 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 C9orf40Q8IXQ3 194 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 GABRG1Q8N1C3 465 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 PNLDC1Q8NA58 520 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 OR7G1Q8NGA0 311 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 OR5AU1Q8NGC0 362 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 MARCH1Q8TCQ1 289 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ZNF721Q8TF20 911 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 PYROXD1Q8WU10 500 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 LHX4Q969G2 390 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 WDR34Q96EX3 536 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SH3YL1Q96HL8 342 aaPredicted RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 GPR22Q99680 433 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 FOXC2Q99958 501 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 DOHHQ9BU89 302 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 ERVK-6Q9BXR3 956 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 NARFLQ9H6Q4 476 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 RPF2Q9H7B2 306 aaKnown RBP5.66□□□□□ -1.5
CLK1-212ENST00000482590 UBTD1Q9HAC8 227 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 WDR41Q9HAD4 459 aa5.66□□□□□ -1.5
CLK1-212ENST00000482590 SPRR3Q9UBC9 169 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms