RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 Q5PR19 223 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 C11orf71Q6IPW1 123 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 CFAP77Q6ZQR2 320 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 SYT9Q86SS6 491 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ERI1Q8IV48 349 aaKnown RBP5.95□□□□□ -1.46
BRCA1-215ENST00000478531 CPOQ8IVL8 374 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF101Q8IZC7 436 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 CBR4Q8N4T8 237 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF511Q8NB15 262 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 BBS1Q8NFJ9 593 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 GJC3Q8NFK1 279 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 OR2AJ1Q8NGZ0 328 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ABHD4Q8TB40 342 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 IGFBPL1Q8WX77 278 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 POM121L2Q96KW2 1035 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 DDOQ99489 341 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 RBM4BQ9BQ04 359 aaKnown RBP5.95□□□□□ -1.46
BRCA1-215ENST00000478531 NMNAT2Q9BZQ4 307 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 PLK3Q9H4B4 646 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 WDR76Q9H967 626 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 SLC25A19Q9HC21 320 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ENOPH1Q9UHY7 261 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 TMEFF2Q9UIK5 374 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-215ENST00000478531 GDF2Q9UK05 429 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-215ENST00000478531 NDRG4Q9ULP0 352 aaKnown RBP5.95□□□□□ -1.46
BRCA1-215ENST00000478531 CMAHPQ9Y471 501 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ORC6Q9Y5N6 252 aa5.95□□□□□ -1.46
BRCA1-215ENST00000478531 ZFHX3Q15911 3703 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 A0A1W2PPW3 197 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 C3orf80F5H4A9 247 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 SYNGR3O43761 229 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 NDUFS7O75251 213 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 DBHP09172 617 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 PSKH1P11801 424 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 WNT5AP41221 380 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 UCP2P55851 309 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 PPP2R2BQ00005 443 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 MSMPQ1L6U9 139 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 ALKBH6Q3KRA9 238 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 CCDC92Q53HC0 331 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 RGS7BPQ6MZT1 257 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 SLC18B1Q6NT16 456 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 RFPL4BQ6ZWI9 263 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 CXXC5Q7LFL8 322 aaKnown RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 LRP11Q86VZ4 500 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 PQLC1Q8N2U9 271 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 OR1J1Q8NGS3 322 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 OR6N2Q8NGY6 317 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 OR1F12Q8NHA8 337 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 EME1Q96AY2 570 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 ZMYND19Q96E35 227 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 TRMT61AQ96FX7 289 aaKnown RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 PITX2Q99697 317 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 VRK1Q99986 396 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 OSBPL10Q9BXB5 764 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 PRRG3Q9BZD7 231 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 MRPL37Q9BZE1 423 aaKnown RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 GRIP2Q9C0E4 1043 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF442Q9H7R0 627 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 DYNLRB1Q9NP97 96 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 HINT3Q9NQE9 182 aaKnown RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 EIF3KQ9UBQ5 218 aaKnown RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 CYB5R1Q9UHQ9 305 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 DUSP13Q9UII6 198 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 GRIP1Q9Y3R0 1128 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 PMF1-BGLAPU3KQ54 211 aa5.94□□□□□ -1.46
BRCA1-215ENST00000478531 NSD1Q96L73 2696 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-215ENST00000478531 OR6C6A6NF89 314 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 VSTM5A8MXK1 200 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 B9A039 149 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 OVOL3O00110 214 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ZNF593O00488 134 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 PRKYO43930 277 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 IGHV4-39P01824 125 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ALPLP05186 524 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 BMP4P12644 408 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 GSTT1P30711 240 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 GLRXP35754 106 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 GGT2P36268 569 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 POLR2IP36954 125 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 NAA10P41227 235 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 RAD52P43351 418 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ENTPD1P49961 510 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 APOFQ13790 326 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 RCN1Q15293 331 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 TESK1Q15569 626 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 MST1LQ2TV78 715 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ZIK1Q3SY52 487 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ELFN2Q5R3F8 820 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 SPATC1Q76KD6 591 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 DCXRQ7Z4W1 244 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 BCDIN3DQ7Z5W3 292 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 WFDC11Q8NEX6 87 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 PTP4A1Q93096 173 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 MRPL24Q96A35 216 aaKnown RBP5.93□□□□□ -1.46
BRCA1-215ENST00000478531 C4orf45Q96LM5 186 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 IL4I1Q96RQ9 567 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 INTS14Q96SY0 518 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 ATF6BQ99941 703 aa5.93□□□□□ -1.46
BRCA1-215ENST00000478531 WACQ9BTA9 647 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms