RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 LYRM9A8MSI8 78 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 HCRTR1O43613 425 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 SMC2O95347 1197 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 CMA1P23946 247 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 KIR2DS4P43632 304 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 CCR6P51684 374 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 STXBP1P61764 594 aaKnown RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 RPS15AP62244 130 aaKnown RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 SELENOTP62341 195 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 GGTLC2Q14390 218 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 PTGES3Q15185 160 aaKnown RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 PTPN20Q4JDL3 420 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 TPRG1LQ5T0D9 272 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 SPECC1LQ69YQ0 1117 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 TIGD3Q6B0B8 471 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 PRMT9Q6P2P2 845 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 ZNF571Q7Z3V5 609 aaPredicted RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 SAXO1Q8IYX7 474 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 TRAM1L1Q8N609 369 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 PRELID2Q8N945 189 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 OR5B3Q8NH48 314 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 OR6X1Q8NH79 312 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 CHCHD10Q8WYQ3 142 aaPredicted RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 ARL5BQ96KC2 179 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 TSSK3Q96PN8 268 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 NAPGQ99747 312 aaPredicted RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 KIR3DX1Q9H7L2 352 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 SIAEQ9HAT2 523 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 CD209Q9NNX6 404 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 ING4Q9UNL4 249 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 YARS2Q9Y2Z4 477 aaKnown RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 V9GY05 133 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 ZNFX1Q9P2E3 1918 aaKnown RBP3.77□□□□□ -1.81
SMC5-203ENST00000475540 IGLV3-22A0A075B6J6 115 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 IGHV3OR16-13A0A075B7E8 117 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 GLYATL1P3A0A0U1RQE8 302 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 TSPAN11A1L157 253 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 RFXANKO14593 260 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 SCAMP2O15127 329 aaKnown RBP3.76□□□□□ -1.81
SMC5-203ENST00000475540 SLC19A2O60779 497 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 EIF3GO75821 320 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMC5-203ENST00000475540 GIPP09681 153 aaPredicted RBP3.76□□□□□ -1.81
SMC5-203ENST00000475540 ACSM4P0C7M7 580 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 DEKP35659 375 aaKnown RBP3.76□□□□□ -1.81
SMC5-203ENST00000475540 NBL1P41271 181 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 HTR2BP41595 481 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 TAS2R19P59542 299 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 TGFBR3Q03167 851 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 PSMD5Q16401 504 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 PSG3Q16557 428 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 NRF1Q16656 503 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 RPEL1Q2QD12 228 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 VAX1Q5SQQ9 334 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 C6orf89Q6UWU4 347 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 ZFP2Q6ZN57 461 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 MBOAT1Q6ZNC8 495 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 ACP7Q6ZNF0 438 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 OR2W3Q7Z3T1 314 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 RDH10Q8IZV5 341 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 PUSL1Q8N0Z8 303 aaKnown RBP3.76□□□□□ -1.81
SMC5-203ENST00000475540 OR51S1Q8NGJ8 323 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 CACNG8Q8WXS5 425 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 ITCHQ96J02 903 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 CYTH2Q99418 400 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 TSG101Q99816 390 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 RARRES2Q99969 163 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 PELOQ9BRX2 385 aaKnown RBP3.76□□□□□ -1.81
SMC5-203ENST00000475540 BEX1Q9HBH7 125 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 ZNF229Q9UJW7 825 aa3.76□□□□□ -1.81
SMC5-203ENST00000475540 RCL1Q9Y2P8 373 aaKnown RBP3.76□□□□□ -1.81
SMC5-203ENST00000475540 SLC22A20A6NK97 555 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 GMDSO60547 372 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 VAPBO95292 243 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 LSM8O95777 96 aaKnown RBP3.75□□□□□ -1.81
SMC5-203ENST00000475540 HBE1P02100 147 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 MAGP20916 626 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 ATP6V1B2P21281 511 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 AQP2P41181 271 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 GLP1RP43220 463 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 EIF4EBP1Q13541 118 aaPredicted RBP3.75□□□□□ -1.81
SMC5-203ENST00000475540 TSC22D1Q15714 1073 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 TRMT5Q32P41 509 aaKnown RBP3.75□□□□□ -1.81
SMC5-203ENST00000475540 C1orf94Q6P1W5 598 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 TMPRSS11AQ6ZMR5 421 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 ZNF546Q86UE3 836 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 LRRC8AQ8IWT6 810 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 C17orf78Q8N4C9 275 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 RNF170Q96K19 258 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 CATSPER2Q96P56 530 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 CHID1Q9BWS9 393 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 OSBPL10Q9BXB5 764 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 BBS2Q9BXC9 721 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 GOLPH3Q9H4A6 298 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 VCX3AQ9NNX9 186 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 AGPAT4Q9NRZ5 378 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 CLN6Q9NWW5 311 aa3.75□□□□□ -1.81
SMC5-203ENST00000475540 COL22A1Q8NFW1 1626 aaPredicted RBP3.74□□□□□ -1.81
SMC5-203ENST00000475540 IGLV4-60A0A075B6I1 120 aa3.74□□□□□ -1.81
SMC5-203ENST00000475540 ENTPD5O75356 428 aa3.74□□□□□ -1.81
SMC5-203ENST00000475540 MED6O75586 246 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms