RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ISG15P05161 165 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CRHP06850 196 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 SPARCP09486 303 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 OR8G3PP0DMU2 310 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CD37P11049 281 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GABRA1P14867 456 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF182P17025 639 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 HOXB4P17483 251 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 NR4A1P22736 598 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 EDNRAP25101 427 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CDAP32320 146 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GDI2P50395 445 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF84P51523 738 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 RIDAP52758 137 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 SH3BGRP55822 239 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 EIF2B1Q14232 305 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 RSPO1Q2MKA7 263 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 YIF1BQ5BJH7 314 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CARD17Q5XLA6 110 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 RTL6Q6ICC9 239 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 OR2A2Q6IF42 318 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 RPTNQ6XPR3 784 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 C1orf229Q6ZS94 237 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 SEM1Q6ZVN7 128 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 FAM214BQ7L5A3 538 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 PRSS45Q7RTY3 260 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 NUFIP2Q7Z417 695 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 FAM220AQ7Z4H9 259 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 DCXRQ7Z4W1 244 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CATSPERDQ86XM0 798 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 PRSS35Q8N3Z0 413 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZFP41Q8N8Y5 198 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GJC3Q8NFK1 279 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 KBTBD8Q8NFY9 601 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 OR10H5Q8NGA6 315 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ABHD4Q8TB40 342 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 NDNFQ8TB73 568 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 HSD17B8Q92506 261 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 SLAMF6Q96DU3 332 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 C4orf45Q96LM5 186 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 FOXN4Q96NZ1 517 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 DCLRE1CQ96SD1 692 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 TM9SF2Q99805 663 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 FOXB1Q99853 325 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CHCHD6Q9BRQ6 235 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF416Q9BWM5 594 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 MROQ9BYG7 248 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 PRRG4Q9BZD6 226 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 SLIRPQ9GZT3 109 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 DCSTAMPQ9H295 470 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZCCHC4Q9H5U6 513 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 EXO5Q9H790 373 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ELOVL3Q9HB03 270 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CRLF2Q9HC73 371 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 CCDC59Q9P031 241 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ATPIF1Q9UII2 106 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GNG8Q9UK08 70 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GSTK1Q9Y2Q3 226 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF281Q9Y2X9 895 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GRIP1Q9Y3R0 1128 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 LRP12Q9Y561 859 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 R4GMQ9 66 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 PMF1-BGLAPU3KQ54 211 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 PRRC2CQ9Y520 2896 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 A0A075B6Q4 140 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TRBV5-7A0A0A0MS05 114 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TRAV1-2A0A0B4J238 106 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TRBV2A0A0J9YWF9 115 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 A0A1W2PPL8 197 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ANKRD61A6NGH8 418 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TMEM212A6NML5 194 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF878C9JN71 531 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 LRRTM2O43300 516 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TMEM127O75204 238 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 RGS9O75916 674 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CGAP01215 116 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 IGLV3-1P01715 115 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 RAF1P04049 648 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 MMP7P09237 267 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 UCHL1P09936 223 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CD8BP10966 210 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 SFTPCP11686 197 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CRYGSP22914 178 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CEACAM8P31997 349 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 TIMP3P35625 211 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 PSMB10P40306 273 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 GUCA1AP43080 201 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 KIR2DL2P43627 348 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 KIR3DL2P43630 455 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 MTNR1BP49286 362 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ROR2Q01974 943 aaKnown RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 SLC3A1Q07837 685 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 EIF2S3LQ2VIR3 472 aaKnown RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CEACAM16Q2WEN9 425 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ACSM3Q53FZ2 586 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CCDC92Q53HC0 331 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-207ENST00000474825 OTPQ5XKR4 325 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 FBXW9Q5XUX1 488 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 CORO6Q6QEF8 472 aa5.8□□□□□ -1.48
ATG4A-207ENST00000474825 ARL9Q6T311 187 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms