RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FBXW10Q5XX13 1052 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ADAM5Q6NVV9 412 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 USP51Q70EK9 711 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 VASH1Q7L8A9 365 aaPredicted RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SLC16A14Q7RTX9 510 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 CDC20BQ86Y33 519 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 LINC00346Q8IVM7 164 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ENTHD1Q8IYW4 607 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 KBTBD8Q8NFY9 601 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 OR8J1Q8NGP2 316 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 OR6K6Q8NGW6 343 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 FAM81AQ8TBF8 368 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ST7LQ8TDW4 575 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 IGFBPL1Q8WX77 278 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SLC7A6Q92536 515 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 TFAP2CQ92754 450 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 POM121L2Q96KW2 1035 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF582Q96NG8 517 aaPredicted RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 RDH12Q96NR8 316 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 TEAD3Q99594 435 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 DNAJC27Q9NZQ0 273 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ENOPH1Q9UHY7 261 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 GDF2Q9UK05 429 aaPredicted RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 TIMM10BQ9Y5J6 103 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SONP18583 2426 aaKnown RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 HIVEP2P31629 2446 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 C5orf63A6NC05 138 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 C12orf71A8MTZ7 269 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 E7EQL1 145 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF593O00488 134 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ENTPD6O75354 484 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 FARS2O95363 451 aaKnown RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ADRA2AP08913 450 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 DBHP09172 617 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 PAICSP22234 425 aaKnown RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 PTAFRP25105 342 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 FMO3P31513 532 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 WNT5AP41221 380 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ENTPD1P49961 510 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ISL1P61371 349 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 NKX6-1P78426 367 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 AQP6Q13520 282 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 KEAP1Q14145 624 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 GGTLC2Q14390 218 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 OCLNQ16625 522 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 SMN1Q16637 294 aaKnown RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 SLC36A2Q495M3 483 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 KLHL12Q53G59 568 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 C6orf52Q5T4I8 152 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF691Q5VV52 312 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 NXNL2Q5VZ03 156 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 DNM1P34Q6PK57 102 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 TMEM108Q6UXF1 575 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF704Q6ZNC4 412 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 MEPCEQ7L2J0 689 aaKnown RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 SSX8Q7RTT4 187 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 DPPA2Q7Z7J5 298 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 SYT9Q86SS6 491 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF101Q8IZC7 436 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 RFLNBQ8N5W9 214 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 FBLIM1Q8WUP2 373 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 TRUB1Q8WWH5 349 aaKnown RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 OTULINQ96BN8 352 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 MBD6Q96DN6 1003 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 PLEKHA8Q96JA3 519 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ADI1Q9BV57 179 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 CLEC4MQ9H2X3 399 aaPredicted RBP6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ADGRL4Q9HBW9 690 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 SLC24A3Q9HC58 644 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 C8orf4Q9NR00 106 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 KCNG2Q9UJ96 466 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 COPS3Q9UNS2 423 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 MOKQ9UQ07 419 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 RNF115Q9Y4L5 304 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ORC6Q9Y5N6 252 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 GMPPBQ9Y5P6 360 aa6.03□□□□□ -1.44
LIMD1-204ENST00000474665 ABCA1O95477 2261 aa6.02□□□□□ -1.44
LIMD1-204ENST00000474665 H0YJX3 145 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 H7C1Q1 480 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 J3QRE1 110 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 SGCEO43556 437 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 GPRIN2O60269 458 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ICMTO60725 284 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 APOL3O95236 402 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 RAB36O95755 333 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 NGFP01138 241 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CD8AP01732 235 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 HLA-DQA2P01906 255 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CD3EP07766 207 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 MRPL3P09001 348 aaKnown RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 DANCRP0C864 163 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 ALOX5APP20292 161 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 NR4A1P22736 598 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 STOMP27105 288 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 HTR1FP30939 366 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 OTX1P32242 354 aaPredicted RBP6.02□□□□□ -1.45
LIMD1-204ENST00000474665 CAPGP40121 348 aa6.02□□□□□ -1.45
LIMD1-204ENST00000474665 NAA10P41227 235 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms