RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SETD3Q86TU7 594 aaPredicted RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 RALGPS2Q86X27 583 aaPredicted RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 PSTKQ8IV42 348 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 NUDCD3Q8IVD9 361 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 PNKDQ8N490 385 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 KIF2BQ8N4N8 673 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 LINC01555Q8NAE3 123 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 FBXO36Q8NEA4 188 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 OR9G1Q8NH87 305 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 ACTL9Q8TC94 416 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 MAGEE2Q8TD90 523 aaPredicted RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 ACER1Q8TDN7 264 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 ARPC1AQ92747 370 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 CDKL2Q92772 493 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 STMN2Q93045 179 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 UCN3Q969E3 161 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 MYDGFQ969H8 173 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 C10orf35Q96D05 121 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 DUS3LQ96G46 650 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 C12orf42Q96LP6 360 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 RBM14Q96PK6 669 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 RNF157Q96PX1 679 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 TAAR1Q96RJ0 339 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 CLCC1Q96S66 551 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 MBOAT4Q96T53 435 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 NPY6RQ99463 290 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 SERPINI1Q99574 410 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 COPS8Q99627 209 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 EBNA1BP2Q99848 306 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 P2RY13Q9BPV8 354 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 CENPKQ9BS16 269 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 ASB7Q9H672 318 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 TDRD3Q9H7E2 651 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 VPS37BQ9H9H4 285 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 PARVBQ9HBI1 364 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 MCCC2Q9HCC0 563 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 SLCO1B3Q9NPD5 702 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 MRPL40Q9NQ50 206 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 XPNPEP1Q9NQW7 623 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 PXMP2Q9NR77 195 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 DCAF16Q9NXF7 216 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 THUMPD1Q9NXG2 353 aaKnown RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 EXTL2Q9UBQ6 330 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 SEC14L3Q9UDX4 400 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 RAB26Q9ULW5 256 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 NEU3Q9UQ49 428 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 PRG3Q9Y2Y8 225 aaPredicted RBP2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 ITGB4P16144 1822 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 FRMPD3Q5JV73 1810 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 MYH2Q9UKX2 1941 aa2.32□□□□□ -2.04
TMEM50B-208ENST00000474272 SCN7AQ01118 1682 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 STRCP1A6NGW2 1772 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 MAST2Q6P0Q8 1798 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 ECM29Q5VYK3 1845 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 SYNJ2BP-COX16A0A087WUM0 186 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 A0A0G2JND7 137 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 LINC00854A0A1B0GVQ3 168 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 CLRN2A0PK11 232 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 GOLGA8IPA6NC78 632 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 RBMY1BA6NDE4 496 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 RBMY1EA6NEQ0 496 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 FAM159BA6NKW6 160 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 GOLGA8JA6NMD2 632 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF701M0R085 212 aaPredicted RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 SGK1O00141 431 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 LSM1O15116 133 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 CLDN9O95484 217 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 INSP01308 110 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 P04436 131 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 RBMY1DP0C7P1 496 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 CHTF8P0CG12 524 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 RBMY1A1P0DJD3 496 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 MYL2P10916 166 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF24P17028 368 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 PRDX3P30048 256 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 MIPP30301 263 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 S100A5P33763 92 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 SERPINB5P36952 375 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 FDFT1P37268 417 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 OPRD1P41143 372 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 MAGEA3P43357 314 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 VDAC2P45880 294 aaPredicted RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 RPL5P46777 297 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 HSPA13P48723 471 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 HCAR3P49019 387 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 DLX1P56177 255 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 TAS2R19P59542 299 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 SEC61GP60059 68 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 EIF3EP60228 445 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 SNAP25P60880 206 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 BASP1P80723 227 aaKnown RBP2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 OGDHQ02218 1023 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 ZNF33AQ06730 810 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 BST1Q10588 318 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 PPIL2Q13356 520 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 PLD1Q13393 1074 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 UNC119Q13432 240 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 TMED2Q15363 201 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 MICBQ29980 383 aa2.31□□□□□ -2.04
TMEM50B-208ENST00000474272 STEAP4Q687X5 459 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms