RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 LSM1O15116 133 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SOCS1O15524 211 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 CHST1O43916 411 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 RDH16O75452 317 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 CIB2O75838 187 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC22A5O76082 557 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SEMA3DO95025 777 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 CD3GP09693 182 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 ERGP11308 486 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 GPX4P36969 197 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC1A1P43005 524 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 TMED10P49755 219 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 RAB10P61026 200 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 CDC20Q12834 499 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 TTC23LQ6PF05 361 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 PLET1Q6UQ28 207 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 UNQ9165/PRO28630Q6UXU0 137 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 IQCKQ8N0W5 287 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 OR4K5Q8NGD3 323 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 OR13G1Q8NGZ3 307 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 PHF10Q8WUB8 498 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 TMEM230Q96A57 120 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 PTX4Q96A99 478 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC25A46Q96AG3 418 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 RBMXL1Q96E39 390 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 OR5B12Q96R08 314 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 RSG1Q9BU20 258 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 FRMD8P1Q9BZ68 369 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 FGF20Q9NP95 211 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 CSDC2Q9Y534 153 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 ASB3Q9Y575 518 aa1.73□□□□□ -2.13
ECHDC1-213ENST00000474240 C9JVG2 144 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 DNASE2O00115 360 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 NUPL2O15504 423 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 FKBP6O75344 327 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 CCNKO75909 580 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 FGFR1OPO95684 399 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 SERPINA5P05154 406 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 RNASE2P10153 161 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 OTX1P32242 354 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 PPP1CBP62140 327 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 IGFBP7Q16270 282 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 RAET1LQ5VY80 246 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 ZFP1Q6P2D0 407 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 CENPQQ7L2Z9 268 aaPredicted RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 NIPA1Q7RTP0 329 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC16A13Q7RTY0 426 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 FAM228AQ86W67 206 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 CBR4Q8N4T8 237 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 CHST4Q8NCG5 386 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 OR4C5Q8NGB2 326 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 SLC38A4Q969I6 547 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 RASD2Q96D21 266 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 METTL7AQ9H8H3 244 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 EXOSC4Q9NPD3 245 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 CCDC59Q9P031 241 aaKnown RBP1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 CTNNA3Q9UI47 895 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 ST3GAL6Q9Y274 331 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 WIF1Q9Y5W5 379 aa1.72□□□□□ -2.13
ECHDC1-213ENST00000474240 KIF26AQ9ULI4 1882 aaPredicted RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 TRBV11-1A0A0K0K1C0 115 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 A6NDN8 102 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 EIF4E2O60573 245 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 EIF1BO60739 113 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 CDRT1O95170 752 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 H6PDO95479 791 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 IGHDP01880 384 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 IGKV4-1P06312 121 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 CTSLP07711 333 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 EIF1P41567 113 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 SLC11A1P49279 550 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 CDKN2DP55273 166 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 CRADDP78560 199 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 PRR3P79522 188 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 KIR2DS1Q14954 304 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 PSMD5Q16401 504 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 XKR7Q5GH72 579 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 SLC8B1Q6J4K2 584 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 SASS6Q6UVJ0 657 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 Q6ZSR3 168 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 MRPL55Q7Z7F7 128 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 CMC1Q7Z7K0 106 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 MMAAQ8IVH4 418 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 WDFY1Q8IWB7 410 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 OSR2Q8N2R0 312 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 APCDD1LQ8NCL9 501 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 OR10G6Q8NH81 332 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 OR52D1Q9H346 318 aa1.71□□□□□ -2.14
ECHDC1-213ENST00000474240 AHDC1Q5TGY3 1603 aaPredicted RBP1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 DOCK9Q9BZ29 2069 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 FAM47DPA6NHR8 397 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 CLOCKO15516 846 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 RAD51CO43502 376 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 REM1O75628 298 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 KRT14P02533 472 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 ACSM4P0C7M7 580 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 ZNF735P0CB33 412 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 GGT1P19440 569 aa1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 HNRNPH3P31942 346 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-213ENST00000474240 TALDO1P37837 337 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms