RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CDH15P55291 814 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 ECH1Q13011 328 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 SCGB2A2Q13296 93 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 VASH1Q7L8A9 365 aaPredicted RBP17.49■□□□□ 0.39
SNX13-206ENST00000474067 PRIMA1Q86XR5 153 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 OR2AJ1Q8NGZ0 328 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 OR1F12Q8NHA8 337 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 RAB1CQ92928 201 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 RAB39BQ96DA2 213 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 LYVE1Q9Y5Y7 322 aa17.49■□□□□ 0.39
SNX13-206ENST00000474067 SRD5A1P18405 259 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 TNFRSF1AP19438 455 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 CDKN2AP42771 156 aaKnown RBP17.48■□□□□ 0.39
SNX13-206ENST00000474067 MAGEB1P43366 347 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 FXYD6P3P58550 94 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 DNAL1Q4LDG9 190 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 SPATA46Q5T0L3 261 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 PGBD2Q6P3X8 592 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 PTCHD4Q6ZW05 846 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 RFPL4BQ6ZWI9 263 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 GLCCI1Q86VQ1 547 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 SAMD8Q96LT4 415 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 COQ7Q99807 217 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 B9D1Q9UPM9 204 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 GRIP1Q9Y3R0 1128 aa17.48■□□□□ 0.39
SNX13-206ENST00000474067 YLPM1P49750 1951 aaKnown RBP17.48■□□□□ 0.39
SNX13-206ENST00000474067 LRP5LA4QPB2 252 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 HLA-DQA2P01906 255 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 RAP2AP10114 183 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 HIST1H1CP16403 213 aaKnown RBP17.47■□□□□ 0.39
SNX13-206ENST00000474067 COL8A2P25067 703 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 DVL1P1P54792 670 aaPredicted RBP17.47■□□□□ 0.39
SNX13-206ENST00000474067 TRAP1Q12931 704 aaKnown RBP17.47■□□□□ 0.39
SNX13-206ENST00000474067 OR2T5Q6IEZ7 315 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 SLC27A4Q6P1M0 643 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 RASSF6Q6ZTQ3 369 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 USP51Q70EK9 711 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 OR2T4Q8NH00 348 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 OR2T29Q8NH02 315 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 OR4K13Q8NH42 304 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 PTP4A1Q93096 173 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 APOBEC3DQ96AK3 386 aaPredicted RBP17.47■□□□□ 0.39
SNX13-206ENST00000474067 C1orf159Q96HA4 380 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 NMNAT3Q96T66 252 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 YY1AP1Q9H869 796 aa17.47■□□□□ 0.39
SNX13-206ENST00000474067 SRA1Q9HD15 236 aaKnown RBP17.47■□□□□ 0.39
SNX13-206ENST00000474067 LYNX1G3V0Z9 82 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 SPRY3O43610 288 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 LYNX1P0DP58 116 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 ZNF823P16415 610 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 ATP6V1B2P21281 511 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 MMP15P51511 669 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 BLVRAP53004 296 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 COX10Q12887 443 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 ZBTB46Q86UZ6 589 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 OR4C15Q8NGM1 316 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 GPA33Q99795 319 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 RPRD1BQ9NQG5 326 aaKnown RBP17.46■□□□□ 0.39
SNX13-206ENST00000474067 TBC1D23Q9NUY8 699 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 IL20Q9NYY1 176 aa17.46■□□□□ 0.39
SNX13-206ENST00000474067 SAMHD1Q9Y3Z3 626 aaKnown RBP17.46■□□□□ 0.39
SNX13-206ENST00000474067 RP2O75695 350 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 NCR1O76036 304 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 NGFP01138 241 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 IFNGP01579 166 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 IGHV1-46P01743 117 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 CD55P08174 381 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 RAC2P15153 192 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 SELEP16581 610 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 KITLGP21583 273 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 IGFBP5P24593 272 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 MPV17P39210 176 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNX13-206ENST00000474067 TSTQ16762 297 aaKnown RBP17.45■□□□□ 0.38
SNX13-206ENST00000474067 FAM120AOSQ5T036 256 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 OR52E2Q8NGJ4 325 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 OR51F2Q8NH61 342 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 BCAS4Q8TDM0 211 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 TMEFF2Q9UIK5 374 aaPredicted RBP17.45■□□□□ 0.38
SNX13-206ENST00000474067 KLHL21Q9UJP4 597 aa17.45■□□□□ 0.38
SNX13-206ENST00000474067 IGLV1-36A0A0B4J1U3 117 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 TCRBV5S2A0A599 114 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 AQP12BA6NM10 295 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 IFNL4K9M1U5 179 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 GNGT2O14610 69 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 CDC14BO60729 498 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 SCG5P05408 212 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 GAAP10253 952 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 TNFAIP6P98066 277 aaPredicted RBP17.44■□□□□ 0.38
SNX13-206ENST00000474067 TRIP10Q15642 601 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 MICAQ29983 383 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 RINLQ6ZS11 566 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 TRPM8Q7Z2W7 1104 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 AQP12AQ8IXF9 295 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 OR6V1Q8N148 313 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 AQP11Q8NBQ7 271 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 SDR9C7Q8NEX9 313 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 SLC26A10Q8NG04 563 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 OR2T33Q8NG76 320 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 CLDND2Q8NHS1 167 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms