RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FAM183AA6NL82 134 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 M0R233 179 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 SSX4O60224 188 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 BAG2O95816 211 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 MT-ND5P03915 603 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 SPARCP09486 303 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 CD99P14209 185 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 PPOXP50336 477 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 KLF3P57682 345 aaPredicted RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 RPS7P62081 194 aaKnown RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 ECH1Q13011 328 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 PTGES3Q15185 160 aaKnown RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 TAF13Q15543 124 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 ZSCAN26Q16670 478 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 KLHL12Q53G59 568 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 PLBD1Q6P4A8 553 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 WFDC11Q8NEX6 87 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 SNX33Q8WV41 574 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 IPCEF1Q8WWN9 437 aaPredicted RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 Q96MF0 132 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 DCLRE1CQ96SD1 692 aaKnown RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 DOK1Q99704 481 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 COQ7Q99807 217 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 MRPL37Q9BZE1 423 aaKnown RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 NMNAT2Q9BZQ4 307 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 MS4A5Q9H3V2 200 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 SLCO1C1Q9NYB5 712 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 H2AFY2Q9P0M6 372 aaPredicted RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 CYB5R1Q9UHQ9 305 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 GDF2Q9UK05 429 aaPredicted RBP11.84□□□□□ -0.51
USF1-205ENST00000473969 LHFPL6Q9Y693 200 aa11.84□□□□□ -0.51
USF1-205ENST00000473969 ZNF593O00488 134 aaPredicted RBP11.83□□□□□ -0.52
USF1-205ENST00000473969 SYNGR3O43761 229 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 MITFO75030 526 aaPredicted RBP11.83□□□□□ -0.52
USF1-205ENST00000473969 GLCEO94923 617 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 CLUP10909 449 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 TUBG1P23258 451 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 GSTT1P30711 240 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 RGS6P49758 472 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 ENTPD1P49961 510 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 EFNA4P52798 201 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 PPP1CBP62140 327 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 DBPQ10586 325 aaPredicted RBP11.83□□□□□ -0.52
USF1-205ENST00000473969 NKPD1Q17RQ9 610 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 CLEC12BQ2HXU8 276 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 SLC18B1Q6NT16 456 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 CLEC2AQ6UVW9 174 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 CXXC5Q7LFL8 322 aaKnown RBP11.83□□□□□ -0.52
USF1-205ENST00000473969 SHFQ7M4L6 423 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 CPOQ8IVL8 374 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 ZNF511Q8NB15 262 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 PTP4A1Q93096 173 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 RHNO1Q9BSD3 238 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 MED20Q9H944 212 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 TUBG2Q9NRH3 451 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 TBCCD1Q9NVR7 557 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 MRPL22Q9NWU5 206 aaKnown RBP11.83□□□□□ -0.52
USF1-205ENST00000473969 TAAR3PQ9P1P4 343 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 COMMD3-BMI1R4GMX3 469 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 CSMD2Q7Z408 3487 aa11.83□□□□□ -0.52
USF1-205ENST00000473969 TMEM129A0AVI4 362 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 H3BNX3 289 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 PRODHO43272 600 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 NDUFS7O75251 213 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
USF1-205ENST00000473969 ADRA2AP08913 450 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 ZNF250P15622 560 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 GGT2P36268 569 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 WNT5AP41221 380 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 RAD23AP54725 363 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 TPTEP56180 551 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 DSCR9P59020 149 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 ERVS71-1P61550 626 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 TEX30Q5JUR7 227 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 SLC35D3Q5M8T2 416 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 SPATA46Q5T0L3 261 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 HIST2H3PS2Q5TEC6 136 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 HIST2H3AQ71DI3 136 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 ERI1Q8IV48 349 aaKnown RBP11.82□□□□□ -0.52
USF1-205ENST00000473969 SLC25A40Q8TBP6 338 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
USF1-205ENST00000473969 SPTSSAQ969W0 71 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 INTS14Q96SY0 518 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 CIB1Q99828 191 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 ATF6BQ99941 703 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 C9orf16Q9BUW7 83 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 RIBC2Q9H4K1 309 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 WDR76Q9H967 626 aa11.82□□□□□ -0.52
USF1-205ENST00000473969 PRRC2AP48634 2157 aaKnown RBP11.81□□□□□ -0.52
USF1-205ENST00000473969 PLSCR5A0PG75 271 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 F5H5K5 113 aa11.81□□□□□ -0.52
USF1-205ENST00000473969 H3BSA7 217 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms