RNA–Protein interactions for RNA: ENST00000473095.1

CHCHD2-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

TSL 1 (best)

Gene CHCHD2, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-202ENST00000473095 NMD3Q96D46 503 aaKnown RBP11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 RSRC1Q96IZ7 334 aaKnown RBP11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 DCLRE1CQ96SD1 692 aaKnown RBP11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 SMURF2Q9HAU4 748 aa11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 CCNB1IP1Q9NPC3 277 aa11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 SOX21Q9Y651 276 aaPredicted RBP11.24□□□□□ -0.61
CHCHD2-202ENST00000473095 AQP12BA6NM10 295 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 CPSF4LA6NMK7 179 aaKnown RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 NGFP01138 241 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 HIST1H2ABP04908 130 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 CDAP32320 146 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 KDELR2P33947 212 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 RBMXP38159 391 aaKnown RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 UGT2B15P54855 530 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 BTG1P62324 171 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 PSG4Q00888 419 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 RPL18Q07020 188 aaKnown RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 SRSF4Q08170 494 aaKnown RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 ZMYND11Q15326 602 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 DUSP7Q16829 419 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 MTX3Q5HYI7 312 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 HIST3H2AQ7L7L0 130 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 HDDC2Q7Z4H3 204 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 TSPYL5Q86VY4 417 aaPredicted RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 AQP12AQ8IXF9 295 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 ADGRG5Q8IZF4 528 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 PARP8Q8N3A8 854 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 SMYD1Q8NB12 490 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 GPR32P1Q8NGA4 272 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 OR4D11Q8NGI4 311 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 OR52E2Q8NGJ4 325 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 AKR7LQ8NHP1 331 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 ABHD4Q8TB40 342 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 ADAMTS16Q8TE57 1224 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 PYDC1Q8WXC3 89 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 HIST1H2ACQ93077 130 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 UPRTQ96BW1 309 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 MPP4Q96JB8 637 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 SAMD8Q96LT4 415 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 SIGLEC11Q96RL6 698 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 MEPEQ9NQ76 525 aaPredicted RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 PDP1Q9P0J1 537 aaPredicted RBP11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 IL20RAQ9UHF4 553 aa11.23□□□□□ -0.61
CHCHD2-202ENST00000473095 A0A1W2PRG6 482 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 DHRS12A0PJE2 317 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 TRAPPC13A5PLN9 417 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 MCIDASD6RGH6 385 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 BLOC1S5-TXNDC5H3BN57 136 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 SLC2A10O95528 541 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 ZNF682O95780 498 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 F13BP05160 661 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 OMGP23515 440 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 CYBRD1Q53TN4 286 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 ESCO2Q56NI9 601 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 ZNF362Q5T0B9 420 aaPredicted RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 ARMC4Q5T2S8 1044 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 FAM27BQ5VT28 67 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 ZER1Q7Z7L7 766 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 PATL1Q86TB9 770 aaKnown RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 RBM45Q8IUH3 476 aaKnown RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 DACT3Q96B18 629 aaPredicted RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 SLCO4A1Q96BD0 722 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 PRSS27Q9BQR3 290 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 OR2H1Q9GZK4 316 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 DCAF13Q9NV06 445 aaKnown RBP11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 OR5V1Q9UGF6 321 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 SLC7A7Q9UM01 511 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
CHCHD2-202ENST00000473095 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 IGKV1D-43A0A0B4J1Z2 117 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 NPIPB13A6NJU9 1138 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 NPIPB4C9JG80 1138 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 H3BNX3 289 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 M0QX08 132 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 GPANK1O95872 356 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 KNG1P01042 644 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 WNT2P09544 360 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 TSPAN19P0C672 248 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 UMPSP11172 480 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 TNFRSF1AP19438 455 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 CD247P20963 164 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 CPT2P23786 658 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 MDH2P40926 338 aaKnown RBP11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 ERVK-25P63136 954 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 PSG7Q13046 419 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 SGCAQ16586 387 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 ZNF774Q6NX45 483 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 CBLL1Q75N03 491 aa11.21□□□□□ -0.61
CHCHD2-202ENST00000473095 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms