RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RAP1BP61224 184 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 MAGOHP61326 146 aaKnown RBP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 RAP1AP62834 184 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 TOP3AQ13472 1001 aaPredicted RBP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 ZMYND11Q15326 602 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 ALG10Q5BKT4 473 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 KLF17Q5JT82 389 aaPredicted RBP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 SLC27A4Q6P1M0 643 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 C16orf87Q6PH81 154 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 PTOV1Q86YD1 416 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 LRRC8CQ8TDW0 803 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 TMEM239Q8WW34 195 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 LIPHQ8WWY8 451 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 TMIGD2Q96BF3 282 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 SSBP3Q9BWW4 388 aaPredicted RBP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 PARD6BQ9BYG5 372 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 NDEL1Q9GZM8 345 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 WNT5BQ9H1J7 359 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 BEX1Q9HBH7 125 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 MEPEQ9NQ76 525 aaPredicted RBP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 TBCCD1Q9NVR7 557 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 KLHL21Q9UJP4 597 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 NDUFAF1Q9Y375 327 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 V9GYY5 206 aaPredicted RBP7.67□□□□□ -1.18
CPSF4-211ENST00000471455 ARHGAP32A7KAX9 2087 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 TGP01266 2768 aa7.67□□□□□ -1.18
CPSF4-211ENST00000471455 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 CEACAM18A8MTB9 384 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 TIMM23O14925 209 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 KITLGP21583 273 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 LAP3P28838 519 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 HTR5AP47898 357 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 MTPNP58546 118 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 RPL27P61353 136 aaKnown RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 GNB2P62879 340 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 GUCY1A3Q02108 690 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 PAX8Q06710 450 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 FMODQ06828 376 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 PSG7Q13046 419 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 ANKDD1AQ495B1 522 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 ZNF774Q6NX45 483 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 SLC25A47Q6Q0C1 308 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 DLEU7Q6UYE1 221 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 RBM45Q8IUH3 476 aaKnown RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 C1orf87Q8N0U7 546 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 BCL6BQ8N143 479 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 DPP10Q8N608 796 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 OR8B3Q8NGG8 313 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 PFN4Q8NHR9 129 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 HDAC2Q92769 488 aaKnown RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 UPRTQ96BW1 309 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 TAMM41Q96BW9 452 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 NMD3Q96D46 503 aaKnown RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 C1orf147Q96MC9 270 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 ZNF48Q96MX3 618 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-211ENST00000471455 OR8B2Q96RD0 313 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 CGREF1Q99674 301 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 SH3GL1Q99961 368 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 PRSS27Q9BQR3 290 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 SLC30A2Q9BRI3 323 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 C1QTNF5Q9BXJ0 243 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 NOX4Q9NPH5 578 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 MIOXQ9UGB7 285 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 RAB21Q9UL25 225 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 SH3GLB1Q9Y371 365 aa7.66□□□□□ -1.18
CPSF4-211ENST00000471455 NOTCH1P46531 2555 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TRRAPQ9Y4A5 3859 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TRAV40A0A0B4J280 105 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 IGHV2-70DA0A0C4DH43 119 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 SRRM5B3KS81 715 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TMEM178BH3BS89 294 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 SGCEO43556 437 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 DOK2O60496 412 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 GPANK1O95872 356 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 PLATP00750 562 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 NGFP01138 241 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TSPAN19P0C672 248 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 MDKP21741 143 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-211ENST00000471455 SRP9P49458 86 aaKnown RBP7.65□□□□□ -1.18
CPSF4-211ENST00000471455 RGS6P49758 472 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 GP2P55259 537 aaKnown RBP7.65□□□□□ -1.18
CPSF4-211ENST00000471455 RAG2P55895 527 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 RPL15P61313 204 aaKnown RBP7.65□□□□□ -1.18
CPSF4-211ENST00000471455 SEC61A1P61619 476 aaKnown RBP7.65□□□□□ -1.18
CPSF4-211ENST00000471455 NFYCQ13952 458 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 PDCD1Q15116 288 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 VMACQ2NL98 169 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TTMPQ5BVD1 217 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TMEM255AQ5JRV8 349 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 ZBTB37Q5TC79 503 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 GPR157Q5UAW9 335 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TMEM86BQ8N661 226 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 ATG16L2Q8NAA4 619 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 OR4D11Q8NGI4 311 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 OR5L1Q8NGL2 311 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 MOSPD2Q8NHP6 518 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TSPEARQ8WU66 669 aa7.65□□□□□ -1.18
CPSF4-211ENST00000471455 TMEM255BQ8WV15 326 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms