RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FLVCR1Q9Y5Y0 555 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 NCOA3Q9Y6Q9 1424 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 RGPD2P0DJD1 1756 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 N4BP2Q86UW6 1770 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 C1orf167Q5SNV9 1468 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 A0A0U1RQS6 177 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR4C46A6NHA9 309 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TRIM77I1YAP6 450 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TOX3O15405 576 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 UTS2O95399 124 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ADRB1P08588 477 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 RRASP10301 218 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 C21orf33P30042 268 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF140P52738 457 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 HIST1H3AP68431 136 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 KIR2DS3Q14952 304 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 Q499Y3 187 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 B3GNT9Q6UX72 402 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM64Q6YI46 380 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ANGPTL5Q86XS5 388 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR2AK2Q8NG84 335 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR4F17Q8NGA8 305 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR5D13Q8NGL4 314 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ERGIC1Q969X5 290 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FAXDC2Q96IV6 333 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF583Q96ND8 569 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 SLC30A3Q99726 388 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 SIRT3Q9NTG7 399 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 USP3Q9Y6I4 520 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FAM221AA4D161 298 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 OR2T8A6NH00 312 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 GLTPD2A6NH11 291 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CTDSP2O14595 271 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MRPS14O60783 128 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 OR2J2O76002 312 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TCRBP04435 133 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CHRM2P08172 466 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 GUSBP08236 651 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 FAM157BP0CG42 384 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CYBAP13498 195 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CALCRP30988 508 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TCTAP57738 103 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TAGLNQ01995 201 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TNFRSF17Q02223 184 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 IL10RAQ13651 578 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ALKBH1Q13686 389 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ATP6V1FQ16864 119 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PRSS45Q7RTY3 260 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 OR51S1Q8NGJ8 323 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 GHSRQ92847 366 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 NEIL2Q969S2 332 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 NECTIN4Q96NY8 510 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TNFRSF13CQ96RJ3 184 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 C12orf57Q99622 126 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 RHOFQ9HBH0 211 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF629Q9UEG4 869 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 AMDHD2Q9Y303 409 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 DNAJC15Q9Y5T4 150 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PHLPP1O60346 1717 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 COL5A2P05997 1499 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TRAV36DV7A0A075B6V5 113 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 A0A0G2JLL6 359 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PRSS38A1L453 326 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 M0R3E3 92 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SELENOFO60613 162 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ALOX12BO75342 701 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ALOX5APP20292 161 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PCSK6P29122 969 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SLC6A11P48066 632 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 B2MP61769 119 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 DCAF7P61962 342 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 EMX1Q04741 257 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SYPL1Q16563 259 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF260Q3ZCT1 412 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TRILQ7L0X0 811 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 NRARPQ7Z6K4 114 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PRRT2Q7Z6L0 340 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 IRF2BP1Q8IU81 584 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 KLHDC8BQ8IXV7 354 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PRSS35Q8N3Z0 413 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 DTWD1Q8N5C7 304 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 C4orf32Q8N8J7 132 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 OR51F2Q8NH61 342 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 CHAC2Q8WUX2 184 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ST8SIA4Q92187 359 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 FAHD2AQ96GK7 314 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ADGRG7Q96K78 797 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM147Q9BVK8 224 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SARGQ9BW04 601 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MRPL37Q9BZE1 423 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MAGT1Q9H0U3 335 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 ST6GALNAC4Q9H4F1 302 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 BCO1Q9HAY6 547 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 MOKQ9UQ07 419 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SLC22A13Q9Y226 551 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PKD1L3Q7Z443 1732 aa6.32□□□□□ -1.4
BRCA1-210ENST00000471181 PARP4Q9UKK3 1724 aaKnown RBP6.32□□□□□ -1.4
BRCA1-210ENST00000471181 TRGV8A0A0C4DH27 118 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms