RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ABCD4O14678 606 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 DBHP09172 617 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SBK2P0C263 348 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 DBTP11182 482 aaKnown RBP12.81□□□□□ -0.36
COL9A3-209ENST00000469852 NAAAQ02083 359 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 HGFACQ04756 655 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
COL9A3-209ENST00000469852 RAB35Q15286 201 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 RSPO1Q2MKA7 263 aaPredicted RBP12.81□□□□□ -0.36
COL9A3-209ENST00000469852 C3orf36Q3SXR2 165 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 ADAM5Q6NVV9 412 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SPATC1Q76KD6 591 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SSX8Q7RTT4 187 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SLC30A7Q8NEW0 376 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 KBTBD8Q8NFY9 601 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 OR2AJ1Q8NGZ0 328 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 OTOSQ8NHW6 89 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 RNFT2Q96EX2 444 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 POM121L2Q96KW2 1035 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 ZNF184Q99676 751 aaPredicted RBP12.81□□□□□ -0.36
COL9A3-209ENST00000469852 TMEM204Q9BSN7 226 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 ABHD6Q9BV23 337 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 ANKRD60Q9BZ19 345 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 ESRP2Q9H6T0 727 aaKnown RBP12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SLC24A3Q9HC58 644 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 NGBQ9NPG2 151 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 HSPE1-MOB4S4R3N1 261 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 SHISA9B4DS77 424 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 ADRA2AP08913 450 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 ZNF35P13682 527 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 PRF1P14222 555 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 ANOS1P23352 680 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 MYF6P23409 242 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 PTAFRP25105 342 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 STOMP27105 288 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 HTR5AP47898 357 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 MTNR1AP48039 350 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 HSPA13P48723 471 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 PLP2Q04941 152 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 ELFN2Q5R3F8 820 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 THAP5Q7Z6K1 395 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 SLC35F2Q8IXU6 374 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
COL9A3-209ENST00000469852 OR1F12Q8NHA8 337 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 LILRB1Q8NHL6 650 aaPredicted RBP12.8□□□□□ -0.36
COL9A3-209ENST00000469852 RFKQ969G6 155 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 LGALS12Q96DT0 336 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 SLAMF6Q96DU3 332 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 TBX5Q99593 518 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 WACQ9BTA9 647 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL9A3-209ENST00000469852 ROS1P08922 2347 aa12.8□□□□□ -0.36
COL9A3-209ENST00000469852 CSMD1Q96PZ7 3565 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 IQCMA0A1B0GVH7 501 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 J3QRE1 110 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 MAGEB4O15481 346 aaPredicted RBP12.79□□□□□ -0.36
COL9A3-209ENST00000469852 CTAG2O75638 210 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 CD3EP07766 207 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 ALOX5APP20292 161 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 CCNOP22674 350 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 WNT5AP41221 380 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 TLE4Q04727 773 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 TMED1Q13445 227 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 THEM6Q8WUY1 208 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 Q96MT0 163 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 YIPF3Q9GZM5 350 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 C1orf198Q9H425 327 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 MOV10Q9HCE1 1003 aaKnown RBP12.79□□□□□ -0.36
COL9A3-209ENST00000469852 RNF115Q9Y4L5 304 aa12.79□□□□□ -0.36
COL9A3-209ENST00000469852 RAI1Q7Z5J4 1906 aaPredicted RBP12.78□□□□□ -0.36
COL9A3-209ENST00000469852 PLCE1Q9P212 2302 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 PSMD9O00233 223 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 XPNPEP2O43895 674 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 TMCC2O75069 709 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 LYNP07948 512 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 COX5BP10606 129 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 PAX7P23759 505 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 APLNRP35414 380 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 SLC15A1P46059 708 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 NR1H2P55055 460 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 KRTAP27-1Q3LI81 207 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 SLC22A25Q6T423 547 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
COL9A3-209ENST00000469852 ALDH16A1Q8IZ83 802 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 ZNF101Q8IZC7 436 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 RNF133Q8WVZ7 376 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 RADILQ96JH8 1075 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 CNBD2Q96M20 576 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 COQ7Q99807 217 aa12.78□□□□□ -0.36
COL9A3-209ENST00000469852 ATF6BQ99941 703 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms