RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 LYSMD4Q5XG99 296 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 CLEC1AQ8NC01 280 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 OR10S1Q8NGN2 331 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 GPX8Q8TED1 209 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 SAP25Q8TEE9 199 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 CHST6Q9GZX3 395 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 ALKBH4Q9NXW9 302 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 SIT1Q9Y3P8 196 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 WIF1Q9Y5W5 379 aa13.08□□□□□ -0.31
CBWD3-205ENST00000469687 RAMP1O60894 148 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 NOS1APO75052 506 aaPredicted RBP13.08□□□□□ -0.32
CBWD3-205ENST00000469687 AQP8O94778 261 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 TPPPO94811 219 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 IL5P05113 134 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 CELA2AP08217 269 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 ACSM4P0C7M7 580 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 FAUP35544 74 aaKnown RBP13.08□□□□□ -0.32
CBWD3-205ENST00000469687 MFAP5Q13361 173 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 EXOSC2Q13868 293 aaKnown RBP13.08□□□□□ -0.32
CBWD3-205ENST00000469687 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 SPICQ8N5J4 248 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 TTC9Q92623 222 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 MED30Q96HR3 178 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 PRO3102Q9H379 93 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 B3GNT2Q9NY97 397 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 B3GALT5Q9Y2C3 310 aa13.08□□□□□ -0.32
CBWD3-205ENST00000469687 TNRC6BQ9UPQ9 1833 aaKnown RBP13.08□□□□□ -0.32
CBWD3-205ENST00000469687 TTRP02766 147 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ISG15P05161 165 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 AKAIN1P0CW23 69 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 PNLIPP16233 465 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ACHEP22303 614 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ANOS1P23352 680 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 CDAP32320 146 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 POU4F3Q15319 338 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 GRK1Q15835 563 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 CFAP77Q6ZQR2 320 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 OR6N1Q8NGY5 312 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 FGGYQ96C11 551 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 SLAMF6Q96DU3 332 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 SEH1LQ96EE3 360 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 MRPL13Q9BYD1 178 aaKnown RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 SLC17A5Q9NRA2 495 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 FAM206AQ9NX38 181 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 TAS2R8Q9NYW2 309 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 NCOA6Q14686 2063 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 OR2M5A3KFT3 312 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 NPIPB13A6NJU9 1138 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 SNRPGP15A8MWD9 76 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 NPIPB4C9JG80 1138 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 M0QYG6 137 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ETV2O00321 342 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 LDLRAD4O15165 306 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ZFAND5O76080 213 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 HRGP04196 525 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 CD37P11049 281 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 CXCL2P19875 107 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 SFTPDP35247 375 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 P2RY4P51582 365 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 H2BFSP57053 126 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 HLA-BQ31612 363 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 PHF19Q5T6S3 580 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 CARD17Q5XLA6 110 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 STEAP1BQ6NZ63 245 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 PPP1R3BQ86XI6 285 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 LYPD6Q86Y78 171 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 GALNT16Q8N428 558 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 UXS1Q8NBZ7 420 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 OR5L2Q8NGL0 311 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 OR6M1Q8NGM8 313 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 NKD1Q969G9 470 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 ADAT3Q96EY9 351 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 MRGPRX4Q96LA9 322 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 RBP7Q96R05 134 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 OR5B2Q96R09 309 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 RASL10BQ96S79 203 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 POTEKPQ9BYX7 375 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 CYB5R1Q9UHQ9 305 aa13.07□□□□□ -0.32
CBWD3-205ENST00000469687 RPH3AQ9Y2J0 694 aaPredicted RBP13.07□□□□□ -0.32
CBWD3-205ENST00000469687 A0A1W2PNV4 684 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 A0A1W2PPL8 197 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 WIPF3A6NGB9 483 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
CBWD3-205ENST00000469687 ZNF28P17035 718 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 B3GNTL1Q67FW5 361 aaPredicted RBP13.06□□□□□ -0.32
CBWD3-205ENST00000469687 GABRG1Q8N1C3 465 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 FAM109AQ8N4B1 249 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 ACBD4Q8NC06 268 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 SOX7Q9BT81 388 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 PTGES2Q9H7Z7 377 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 CNTD2Q9H8S5 307 aa13.06□□□□□ -0.32
CBWD3-205ENST00000469687 KLHL13Q9P2N7 655 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms