RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PSG7Q13046 419 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 RBMS3Q6XE24 437 aaKnown RBP14.86□□□□□ -0.03
COL7A1-206ENST00000466591 VASH1Q7L8A9 365 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-206ENST00000466591 RNF148Q8N7C7 305 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-206ENST00000466591 FANK1Q8TC84 345 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 GCDHQ92947 438 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-206ENST00000466591 CMBLQ96DG6 245 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 SUCNR1Q9BXA5 334 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 ZNF446Q9NWS9 450 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 PURGQ9UJV8 347 aaKnown RBP14.86□□□□□ -0.03
COL7A1-206ENST00000466591 NPTNQ9Y639 398 aa14.86□□□□□ -0.03
COL7A1-206ENST00000466591 A0A1W2PRQ8 180 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 UBOX5O94941 541 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 DIRAS1O95057 198 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 VENTXO95231 258 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 RENP00797 406 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 ADRA2CP18825 462 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 FPR2P25090 351 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 CRABP1P29762 137 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 DGCR6Q14129 220 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 OTPQ5XKR4 325 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 PGM2L1Q6PCE3 622 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 SMARCD3Q6STE5 483 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 CPLX4Q7Z7G2 160 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 OR5AS1Q8N127 324 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 FAM156AQ8NDB6 213 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 OR1F12Q8NHA8 337 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 ERMAPQ96PL5 475 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-206ENST00000466591 CDADC1Q9BWV3 514 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 TMEM106BQ9NUM4 274 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 PPP1R3CQ9UQK1 317 aa14.85□□□□□ -0.03
COL7A1-206ENST00000466591 OR6C6A6NF89 314 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 ICMTO60725 284 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 PRSS23O95084 383 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 GADD45GO95257 159 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 PPP1R3DO95685 299 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 HLA-DQA2P01906 255 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 SCG5P05408 212 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 CD55P08174 381 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 SLC6A6P31641 620 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 IFNGR2P38484 337 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 RGS6P49758 472 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 LSM6P62312 80 aaKnown RBP14.84□□□□□ -0.03
COL7A1-206ENST00000466591 MXRA7P84157 204 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 ARMCX4Q5H9R4 360 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 DPY19L2P2Q6ZN68 376 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 FAM122BQ7Z309 247 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 C1QL2Q7Z5L3 287 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 GJC3Q8NFK1 279 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 ZFAND2BQ8WV99 257 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 PTP4A1Q93096 173 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 NUAK2Q9H093 628 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 G6PC2Q9NQR9 355 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 PTTG3PQ9NZH4 202 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 NDUFAF4Q9P032 175 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 TMCC3Q9ULS5 477 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 SIGLEC7Q9Y286 467 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 SVEP1Q4LDE5 3571 aa14.84□□□□□ -0.03
COL7A1-206ENST00000466591 TRBV4-1A0A0J9YWV2 114 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 OR10H3O60404 316 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 DEAF1O75398 565 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-206ENST00000466591 ADH4P08319 380 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 CDK5R2Q13319 367 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 FHL1Q13642 323 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 SLC27A4Q6P1M0 643 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 LEG1Q6P5S2 330 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 C3orf56Q8N813 242 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 OR2AJ1Q8NGZ0 328 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 SLC7A6Q92536 515 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 SAMD8Q96LT4 415 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 ZNF582Q96NG8 517 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-206ENST00000466591 OR2V2Q96R30 315 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 IFT27Q9BW83 186 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 RBM4Q9BWF3 364 aaKnown RBP14.83□□□□□ -0.04
COL7A1-206ENST00000466591 NRIP3Q9NQ35 241 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 ABCD2Q9UBJ2 740 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 IL19Q9UHD0 177 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 MAGEL2Q9UJ55 1249 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 STARD10Q9Y365 291 aa14.83□□□□□ -0.04
COL7A1-206ENST00000466591 RER1O15258 196 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 PRDX6P30041 224 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 BTG1P62324 171 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 ESCO2Q56NI9 601 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 TMEM255AQ5JRV8 349 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 C8orf82Q6P1X6 216 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-206ENST00000466591 ITLN1Q8WWA0 313 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 APOBEC3DQ96AK3 386 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-206ENST00000466591 SLC6A7Q99884 636 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 MRI1Q9BV20 369 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 HCAR1Q9BXC0 346 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 TMPRSS13Q9BYE2 586 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 HDHD2Q9H0R4 259 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 POFUT1Q9H488 388 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 SRA1Q9HD15 236 aaKnown RBP14.82□□□□□ -0.04
COL7A1-206ENST00000466591 DCAF13Q9NV06 445 aaKnown RBP14.82□□□□□ -0.04
COL7A1-206ENST00000466591 VSX1Q9NZR4 365 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-206ENST00000466591 OR5V1Q9UGF6 321 aa14.82□□□□□ -0.04
COL7A1-206ENST00000466591 LRRC30A6NM36 301 aa14.81□□□□□ -0.04
COL7A1-206ENST00000466591 J3QW42 95 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms