RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 MARCH7Q9H992 704 aa12.22□□□□□ -0.45
MCF2L-220ENST00000464800 C1RLQ9NZP8 487 aa12.22□□□□□ -0.45
MCF2L-220ENST00000464800 MED31Q9Y3C7 131 aa12.22□□□□□ -0.45
MCF2L-220ENST00000464800 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.45
MCF2L-220ENST00000464800 CLPSL1A2RUU4 121 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 ZNF205O95201 554 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 OR5F1O95221 314 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 SCRN3Q0VDG4 424 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 NFYCQ13952 458 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 GPR157Q5UAW9 335 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 SLC27A4Q6P1M0 643 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 NLRC3Q7RTR2 1065 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 ATG16L2Q8NAA4 619 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 OR8B3Q8NGG8 313 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 OR10A6Q8NH74 314 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 ZNF420Q8TAQ5 688 aaPredicted RBP12.21□□□□□ -0.45
MCF2L-220ENST00000464800 HAVCR1Q96D42 359 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 COG8Q96MW5 612 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 OR8B2Q96RD0 313 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 NUDT16L1Q9BRJ7 211 aaKnown RBP12.21□□□□□ -0.45
MCF2L-220ENST00000464800 CHIAQ9BZP6 476 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 POLR2J2Q9GZM3 115 aaKnown RBP12.21□□□□□ -0.45
MCF2L-220ENST00000464800 POLR2J3Q9H1A7 115 aaKnown RBP12.21□□□□□ -0.45
MCF2L-220ENST00000464800 NOX4Q9NPH5 578 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 HIF3AQ9Y2N7 669 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.45
MCF2L-220ENST00000464800 KIR2DS1A0A191URI9 304 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 A6NIZ1 184 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 CYB5R3P00387 301 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-220ENST00000464800 THRBP10828 461 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 PITPNBP48739 271 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 ERFP50548 548 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 GZMMP51124 257 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 CRYBA2P53672 197 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 BPIFB3P59826 476 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 RAP1BP61224 184 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 RAP1AP62834 184 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 RELBQ01201 579 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 PDCD1Q15116 288 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 VMACQ2NL98 169 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 Q6YL49 198 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 CCDC80Q76M96 950 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 RHOUQ7L0Q8 258 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 OR5AS1Q8N127 324 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 OR10AD1Q8NGE0 317 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 TSPEARQ8WU66 669 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 STON2Q8WXE9 905 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 ATP6V1G3Q96LB4 118 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 RBM4BQ9BQ04 359 aaKnown RBP12.2□□□□□ -0.46
MCF2L-220ENST00000464800 SLC30A2Q9BRI3 323 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 WACQ9BTA9 647 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 TMEM165Q9HC07 324 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 POLE4Q9NR33 117 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 RIMS3Q9UJD0 308 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 STARD10Q9Y365 291 aa12.2□□□□□ -0.46
MCF2L-220ENST00000464800 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 SGCEO43556 437 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 PIP5K1CO60331 668 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-220ENST00000464800 RAC2P15153 192 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 TNFRSF1BP20333 461 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 SRP9P49458 86 aaKnown RBP12.19□□□□□ -0.46
MCF2L-220ENST00000464800 CTXN1P60606 82 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 FGF12P61328 243 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 ZNF404Q494X3 552 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 TTMPQ5BVD1 217 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 C1orf94Q6P1W5 598 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 VASH1Q7L8A9 365 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-220ENST00000464800 IGFN1Q86VF2 1251 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 FITM2Q8N6M3 262 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 PTP4A1Q93096 173 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 FAM71F1Q96KD3 344 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-220ENST00000464800 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 KIF17Q9P2E2 1029 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 POMT1Q9Y6A1 747 aa12.19□□□□□ -0.46
MCF2L-220ENST00000464800 PHYHO14832 338 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 ENSAO43768 121 aaKnown RBP12.18□□□□□ -0.46
MCF2L-220ENST00000464800 FSTL3O95633 263 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 MELTFP08582 738 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 RPL15P61313 204 aaKnown RBP12.18□□□□□ -0.46
MCF2L-220ENST00000464800 PIN1Q13526 163 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-220ENST00000464800 ZNF181Q2M3W8 571 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 NANOGP8Q6NSW7 305 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 MOGAT3Q86VF5 341 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 C1orf87Q8N0U7 546 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 OR13G1Q8NGZ3 307 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 BPIFA2Q96DR5 249 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 INTS9Q9NV88 658 aaKnown RBP12.18□□□□□ -0.46
MCF2L-220ENST00000464800 BAG5Q9UL15 447 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 RNF114Q9Y508 228 aa12.18□□□□□ -0.46
MCF2L-220ENST00000464800 H7C1C5 153 aa12.17□□□□□ -0.46
MCF2L-220ENST00000464800 J3QW42 95 aa12.17□□□□□ -0.46
MCF2L-220ENST00000464800 SCG5P05408 212 aa12.17□□□□□ -0.46
MCF2L-220ENST00000464800 IFI30P13284 250 aa12.17□□□□□ -0.46
MCF2L-220ENST00000464800 SELEP16581 610 aa12.17□□□□□ -0.46
MCF2L-220ENST00000464800 KRTAP10-3P60369 221 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms