RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 DUPD1Q68J44 220 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 USP50Q70EL3 339 aaPredicted RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 PIANPQ8IYJ0 282 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 ACOT4Q8N9L9 421 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 HSD17B11Q8NBQ5 300 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 VN1R2Q8NFZ6 395 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 OR5D18Q8NGL1 313 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 OR6K2Q8NGY2 324 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 OR56B4Q8NH76 319 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 RFESDQ8TAC1 157 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 ITFG1Q8TB96 612 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 PHF10Q8WUB8 498 aaKnown RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 IL1F10Q8WWZ1 152 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 MRPS31Q92665 395 aaKnown RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 FGF11Q92914 225 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 OTUB2Q96DC9 234 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 MS4A14Q96JA4 679 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 DNAJC1Q96KC8 554 aaKnown RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 HSFY1Q96LI6 401 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 MCCC1Q96RQ3 725 aaPredicted RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 MRPL45Q9BRJ2 306 aaKnown RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 COPS4Q9BT78 406 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 YTHDF1Q9BYJ9 559 aaKnown RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 LIME1Q9H400 295 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 TMEM38AQ9H6F2 299 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 METTL8Q9H825 291 aaKnown RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 UBE2ZQ9H832 354 aaPredicted RBP3□□□□□ -1.93
ITGB1-208ENST00000464001 WDR41Q9HAD4 459 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 TMBIM4Q9HC24 238 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 IFT46Q9NQC8 304 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 MCUBQ9NWR8 336 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 C1orf109Q9NX04 203 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 SLC25A37Q9NYZ2 338 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 SLC2A6Q9UGQ3 507 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 LGALS13Q9UHV8 139 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 GNPTGQ9UJJ9 305 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 CFL2Q9Y281 166 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 MAP3K5Q99683 1374 aa3□□□□□ -1.93
ITGB1-208ENST00000464001 A0A0A6YYD5 115 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TRGV8A0A0C4DH27 118 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 GLYATL1P3A0A0U1RQE8 302 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 USP27XA6NNY8 438 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 RNF212BA8MTL3 300 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 FAM220BPB1ANY3 271 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 H0YHG0 523 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 SULT2B1O00204 365 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 MRPS12O15235 138 aaKnown RBP2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ZNF749O43361 778 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 SOX15O60248 233 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 EEDO75530 441 aaKnown RBP2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TRAPPC6AO75865 159 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 GJB5O95377 273 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 PSMG1O95456 288 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 LSM8O95777 96 aaKnown RBP2.99□□□□□ -1.93
ITGB1-208ENST00000464001 HBE1P02100 147 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 C2P06681 752 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TACSTD2P09758 323 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ZNF250P15622 560 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 FCGR2CP31995 323 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TFPI2P48307 235 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 DNASE1L1P49184 302 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TGM4P49221 684 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 AP3S2P59780 193 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 RND3P61587 244 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 STXBP1P61764 594 aaKnown RBP2.99□□□□□ -1.93
ITGB1-208ENST00000464001 PAFAH1B2P68402 229 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 SLC35B1P78383 322 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 CYP24A1Q07973 514 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 IL18R1Q13478 541 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ECSCRQ19T08 205 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 PGGHGQ32M88 737 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ACTL10Q5JWF8 245 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 OR5M10Q6IEU7 315 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ARMCX5Q6P1M9 558 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TRIM40Q6P9F5 258 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 SSX6Q7RTT6 188 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 CARM1Q86X55 608 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 HIPK1Q86Z02 1210 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ENTHD1Q8IYW4 607 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 PRR22Q8IZ63 422 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 C2orf73Q8N5S3 287 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-208ENST00000464001 LRRC52Q8N7C0 313 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 OR4K2Q8NGD2 314 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 OR2G2Q8NGZ5 317 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ADAMTS16Q8TE57 1224 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 PYROXD1Q8WU10 500 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TCTEX1D2Q8WW35 142 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 CPNE4Q96A23 557 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-208ENST00000464001 WDR34Q96EX3 536 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 MBOAT7Q96N66 472 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 COL21A1Q96P44 957 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 SORT1Q99523 831 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 CIB1Q99828 191 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 FOXC2Q99958 501 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 NICN1Q9BSH3 213 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 ELOVL4Q9GZR5 314 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 TOLLIPQ9H0E2 274 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 OR51B6Q9H340 312 aa2.99□□□□□ -1.93
ITGB1-208ENST00000464001 PLEKHJ1Q9NW61 149 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms