RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 UBOX5O94941 541 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 CD55P08174 381 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 ANPEPP15144 967 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 GSTM3P21266 225 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 GYS2P54840 703 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 GNGT1P63211 74 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 SPIBQ01892 262 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 RFX4Q33E94 735 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 CCDC92Q53HC0 331 aaPredicted RBP16.07■□□□□ 0.16
VARS-220ENST00000461874 ACSM5Q6NUN0 579 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 RFLNBQ8N5W9 214 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 SLC7A6Q92536 515 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 MCUR1Q96AQ8 359 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 TIMD4Q96H15 378 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 NSMCE2Q96MF7 247 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 C19orf24Q9BVV8 132 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 STARD10Q9Y365 291 aa16.07■□□□□ 0.16
VARS-220ENST00000461874 TRAV20A0A0B4J274 112 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 DEAF1O75398 565 aaPredicted RBP16.06■□□□□ 0.16
VARS-220ENST00000461874 PPP1R3DO95685 299 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 CRABP1P29762 137 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 CDK5R2Q13319 367 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 SPRNQ5BIV9 151 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 LIPNQ5VXI9 398 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 OR1F12Q8NHA8 337 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 FANK1Q8TC84 345 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 RAB39BQ96DA2 213 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 CMBLQ96DG6 245 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 TSSK2Q96PF2 358 aa16.06■□□□□ 0.16
VARS-220ENST00000461874 ERMAPQ96PL5 475 aaPredicted RBP16.06■□□□□ 0.16
VARS-220ENST00000461874 PURGQ9UJV8 347 aaKnown RBP16.06■□□□□ 0.16
VARS-220ENST00000461874 DCTN6O00399 190 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 ARPC3O15145 178 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 RER1O15258 196 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 IGHV2-5P01817 119 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 FABP3P05413 133 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 KITLGP21583 273 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 FPR3P25089 353 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 SLC6A6P31641 620 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 SLC3A1Q07837 685 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 SPATS1Q496A3 300 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 DNM1P34Q6PK57 102 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 HAVCR1Q96D42 359 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 COG8Q96MW5 612 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 OR52D1Q9H346 318 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 IL1RAPQ9NPH3 570 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 G6PC2Q9NQR9 355 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 ATPIF1Q9UII2 106 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 METRNQ9UJH8 293 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 B9D1Q9UPM9 204 aa16.05■□□□□ 0.16
VARS-220ENST00000461874 IGLV1-36A0A0B4J1U3 117 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 TCF21O43680 179 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 PLPP2O43688 288 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 OR10H3O60404 316 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 DCTN3O75935 186 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 GPANK1O95872 356 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 RRM2P31350 389 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 IFNGR2P38484 337 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 CENPAP49450 140 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 HIST1H3AP68431 136 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 TNFAIP6P98066 277 aaPredicted RBP16.04■□□□□ 0.16
VARS-220ENST00000461874 HIST2H3PS2Q5TEC6 136 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 C1orf94Q6P1W5 598 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 FAHD2BQ6P2I3 314 aaPredicted RBP16.04■□□□□ 0.16
VARS-220ENST00000461874 PGM2L1Q6PCE3 622 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 C16orf89Q6UX73 402 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 Q6ZR03 302 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 HIST2H3AQ71DI3 136 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 DEFB107AQ8IZN7 70 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 OR6V1Q8N148 313 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 PTP4A1Q93096 173 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 FAHD2AQ96GK7 314 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 DCLRE1CQ96SD1 692 aaKnown RBP16.04■□□□□ 0.16
VARS-220ENST00000461874 NMNAT3Q96T66 252 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 IFT27Q9BW83 186 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 METTL17Q9H7H0 456 aaPredicted RBP16.04■□□□□ 0.16
VARS-220ENST00000461874 SRA1Q9HD15 236 aaKnown RBP16.04■□□□□ 0.16
VARS-220ENST00000461874 NDE1Q9NXR1 346 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 TMCC3Q9ULS5 477 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 POLR1DQ9Y2S0 133 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 LHFPL6Q9Y693 200 aa16.04■□□□□ 0.16
VARS-220ENST00000461874 J3QW42 95 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 DBHP09172 617 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 HIST1H1CP16403 213 aaKnown RBP16.03■□□□□ 0.16
VARS-220ENST00000461874 GSSP48637 474 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 RGS6P49758 472 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 MEP1BQ16820 701 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 LEG1Q6P5S2 330 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 JAZF1Q86VZ6 243 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 ZDHHC21Q8IVQ6 265 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 GJC3Q8NFK1 279 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 OR4K13Q8NH42 304 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 SAMD8Q96LT4 415 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 GAL3ST1Q99999 423 aa16.03■□□□□ 0.16
VARS-220ENST00000461874 IDH3BO43837 385 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 PNPP00491 289 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 RENP00797 406 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 RAC2P15153 192 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 TNFSF4P23510 183 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 ERFP50548 548 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms