RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CLDN8P56748 225 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 ARG2P78540 354 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 NCF4Q15080 339 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 RGNQ15493 299 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 TRMT5Q32P41 509 aaKnown RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 HSP90AA4PQ58FG1 418 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 TMEM255AQ5JRV8 349 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 METTL21CQ5VZV1 264 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 ARL9Q6T311 187 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 LYPD2Q6UXB3 125 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 TIFABQ6ZNK6 161 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 MBOAT2Q6ZWT7 520 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 ABHD12BQ7Z5M8 362 aaPredicted RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 PCP2Q8IVA1 136 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 MYOCDQ8IZQ8 938 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 STPG2Q8N412 459 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 CHST4Q8NCG5 386 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 OR10G4Q8NGN3 311 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 C9orf72Q96LT7 481 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 OPALINQ96PE5 141 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 BCL7BQ9BQE9 202 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 SLC25A39Q9BZJ4 359 aaPredicted RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 C8orf33Q9H7E9 229 aaPredicted RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 CYP3A43Q9HB55 503 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 FANCEQ9HB96 536 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 ACP6Q9NPH0 428 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 DYRK4Q9NR20 520 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 MCUBQ9NWR8 336 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 SLC39A1Q9NY26 324 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 PEF1Q9UBV8 284 aaKnown RBP2.12□□□□□ -2.07
VCL-203ENST00000461383 C2orf16Q68DN1 1984 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 CAMTA1Q9Y6Y1 1673 aa2.12□□□□□ -2.07
VCL-203ENST00000461383 NACAE9PAV3 2078 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 DOCK9Q9BZ29 2069 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 SERPINE3A8MV23 424 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 H0YHG0 523 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PANO1I0J062 215 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 XRCC2O43543 280 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 SPAG7O75391 227 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 FARS2O95363 451 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 ERGP11308 486 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 GZMAP12544 262 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CTRB1P17538 263 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PRKACAP17612 351 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CSNK2A2P19784 350 aaPredicted RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 MDKP21741 143 aaPredicted RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 IL32P24001 234 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CD82P27701 267 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 LONP1P36776 959 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 GPR1P46091 355 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 P2RX1P51575 399 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 ZNF136P52737 540 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CRISP3P54108 245 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PSMD4P55036 377 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 UBE2NP61088 152 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 PPP1CBP62140 327 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 RPS15AP62244 130 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 RAP1AP62834 184 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CDH17Q12864 832 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CAPRIN1Q14444 709 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 ZNF266Q14584 549 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 MLIPQ5VWP3 458 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 ADNP2Q6IQ32 1131 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 DNAJC24Q6P3W2 148 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 ULK3Q6PHR2 472 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PLET1Q6UQ28 207 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 LINC01551Q86U37 167 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 APRG1Q8IVJ8 170 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 FAM71AQ8IYT1 594 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 VKORC1L1Q8N0U8 176 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 METTL13Q8N6R0 699 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 ZNF433Q8N7K0 673 aaPredicted RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 C8orf31Q8N9H6 132 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PROKR2Q8NFJ6 384 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 OR5T3Q8NGG3 340 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 OR56A4Q8NGH8 313 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 OR52E2Q8NGJ4 325 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 OR6Q1Q8NGQ2 317 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 ZFP90Q8TF47 636 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PIH1D2Q8WWB5 315 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 GIMAP1Q8WWP7 306 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 ZNF799Q96GE5 643 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 PLA2G2FQ9BZM2 168 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 IL22Q9GZX6 179 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 EDA2RQ9HAV5 297 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 NOX3Q9HBY0 568 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 CLN6Q9NWW5 311 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 IFNKQ9P0W0 207 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 RCL1Q9Y2P8 373 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 PRG3Q9Y2Y8 225 aaPredicted RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 YARS2Q9Y2Z4 477 aaKnown RBP2.11□□□□□ -2.07
VCL-203ENST00000461383 RHBDD3Q9Y3P4 386 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 MROH7-TTC4A0A0A0MT08 1334 aa2.11□□□□□ -2.07
VCL-203ENST00000461383 IGHV3-66A0A0C4DH42 116 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 A0A1W2PP18 115 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 TRDMT1O14717 391 aaKnown RBP2.1□□□□□ -2.07
VCL-203ENST00000461383 SIVA1O15304 175 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ANGPTL7O43827 346 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 HPRT1P00492 218 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 MBP02144 154 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms