RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 KIAA1324LA8MWY0 1029 aaPredicted RBP13.17□□□□□ -0.3
VARS-219ENST00000461328 BHLHE40O14503 412 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 RER1O15258 196 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 GAAP10253 952 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 ZNF23P17027 643 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 GIFP27352 417 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 SLC36A3Q495N2 470 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
VARS-219ENST00000461328 CYB561A3Q8NBI2 242 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 OR8D4Q8NGM9 314 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 SLC25A40Q8TBP6 338 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 IPCEF1Q8WWN9 437 aaPredicted RBP13.17□□□□□ -0.3
VARS-219ENST00000461328 OR2J1Q9GZK6 312 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 BAIAP2Q9UQB8 552 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 GRIP1Q9Y3R0 1128 aa13.17□□□□□ -0.3
VARS-219ENST00000461328 IGLV3-9A0A075B6K5 115 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 LYNX1G3V0Z9 82 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 H3BN98 237 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 GSC2O15499 205 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 TPD52L2O43399 206 aaKnown RBP13.16□□□□□ -0.3
VARS-219ENST00000461328 FKBP6O75344 327 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 ATP5HO75947 161 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 IFNGP01579 166 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 LYNX1P0DP58 116 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 MPV17P39210 176 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 CBX1P83916 185 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 TEKQ02763 1124 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 DBPQ10586 325 aaPredicted RBP13.16□□□□□ -0.3
VARS-219ENST00000461328 KCNMB1Q16558 191 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 CORO6Q6QEF8 472 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 C1orf174Q8IYL3 243 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 NPEPL1Q8NDH3 523 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 GJC3Q8NFK1 279 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 SLC26A10Q8NG04 563 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 OR2T4Q8NH00 348 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 FEVQ99581 238 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 NIPSNAP1Q9BPW8 284 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 CDADC1Q9BWV3 514 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 CADM1Q9BY67 442 aaKnown RBP13.16□□□□□ -0.3
VARS-219ENST00000461328 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 IL20Q9NYY1 176 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 PDP1Q9P0J1 537 aaPredicted RBP13.16□□□□□ -0.3
VARS-219ENST00000461328 CDC42EP3Q9UKI2 254 aa13.16□□□□□ -0.3
VARS-219ENST00000461328 LOC100289279A0A1B0GTE1 492 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 LRP5LA4QPB2 252 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 C17orf100A8MU93 164 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 H3BSA7 217 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 LMX1BO60663 402 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 NGFP01138 241 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 ZNF823P16415 610 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 PYCR1P32322 319 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 CHN2P52757 468 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 CCDC92Q53HC0 331 aaPredicted RBP13.15□□□□□ -0.3
VARS-219ENST00000461328 FAM166AQ6J272 317 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 LINC00346Q8IVM7 164 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 LNX2Q8N448 690 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 OR9Q1Q8NGQ5 310 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 OR2AJ1Q8NGZ0 328 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 KLF14Q8TD94 323 aaPredicted RBP13.15□□□□□ -0.3
VARS-219ENST00000461328 SLC7A6Q92536 515 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 MARS2Q96GW9 593 aaKnown RBP13.15□□□□□ -0.3
VARS-219ENST00000461328 HDHD2Q9H0R4 259 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 CHODLQ9H9P2 273 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 KLHL21Q9UJP4 597 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 KCNS2Q9ULS6 477 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 LHFPL6Q9Y693 200 aa13.15□□□□□ -0.3
VARS-219ENST00000461328 TCRBV3S1A0A5B6 114 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 OR6C6A6NF89 314 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 TIMM8AO60220 97 aaPredicted RBP13.14□□□□□ -0.31
VARS-219ENST00000461328 NCR1O76036 304 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 IFNA2P01563 188 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 IGHV3-13P01766 116 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 TFP02787 698 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 HPXP02790 462 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 ZNF3P17036 446 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 POU1F1P28069 291 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 MAGEB1P43366 347 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 ZNF81P51508 661 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 CCL8P80075 99 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 COX10Q12887 443 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 RIN1Q13671 783 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 CRMP1Q14194 572 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 PCGF3Q3KNV8 242 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 ELFN2Q5R3F8 820 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
VARS-219ENST00000461328 IQCF1Q8N6M8 205 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 SLC37A3Q8NCC5 494 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 OR4Q3Q8NH05 313 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 GTF3AQ92664 365 aaKnown RBP13.14□□□□□ -0.31
VARS-219ENST00000461328 RDH5Q92781 318 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 MSI2Q96DH6 328 aaKnown RBP13.14□□□□□ -0.31
VARS-219ENST00000461328 PITX2Q99697 317 aa13.14□□□□□ -0.31
VARS-219ENST00000461328 BEX2Q9BXY8 128 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms