RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 NT5EP21589 574 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ITGA3P26006 1051 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 MPGP29372 298 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 WNT5AP41221 380 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 RGS6P49758 472 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF41P51814 821 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 NR0B1P51843 470 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PNLIPRP2P54317 469 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PSME3P61289 254 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC3A1Q07837 685 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 TGM3Q08188 693 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 BTN1A1Q13410 526 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 SLC36A3Q495N2 470 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ATP6AP1LQ52LC2 224 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 TRMT12Q53H54 448 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PRR30Q53SZ7 412 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 Q5BKY6 102 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 DCAF10Q5QP82 559 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 LRIF1Q5T3J3 769 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 OR4F3Q6IEY1 312 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 EPGNQ6UW88 154 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 TEX261Q6UWH6 196 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 HSD17B13Q7Z5P4 300 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 CPEB2Q7Z5Q1 589 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 CRLF3Q8IUI8 442 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 MCEMP1Q8IX19 187 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 SKA3Q8IX90 412 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF595Q8IYB9 648 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PRR22Q8IZ63 422 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 CLECL1Q8IZS7 167 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 STPG2Q8N412 459 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 WDSUB1Q8N9V3 476 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PLPP5Q8NEB5 264 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 Q8NFD4 153 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 FDCSPQ8NFU4 85 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 OR4M1Q8NGD0 313 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 OR9A2Q8NGT5 310 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 OR14L1PQ8NHC6 308 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 SFT2D1Q8WV19 159 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 FCRL1Q96LA6 429 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF681Q96N22 645 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 RDH12Q96NR8 316 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 FAM110AQ9BQ89 295 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 QTRT1Q9BXR0 403 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 HES7Q9BYE0 225 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 OR8D2Q9GZM6 311 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 NXF2Q9GZY0 626 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 AAMDCQ9H7C9 122 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 MEAF6Q9HAF1 191 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 SEBOXQ9HB31 216 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 LYRM4Q9HD34 91 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 NANSQ9NR45 359 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 GPR83Q9NYM4 423 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 AHSPQ9NZD4 102 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 MLXQ9UH92 298 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 IL19Q9UHD0 177 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 UBQLN2Q9UHD9 624 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PADI2Q9Y2J8 665 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 PEX16Q9Y5Y5 336 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 U3KQ87 197 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 FREM3P0C091 2139 aa4.28□□□□□ -1.72
ATPAF1-203ENST00000460928 ZNF407Q9C0G0 2248 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 LOC102723996A0A087X1L8 192 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A0G2JMM0 328 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TRBV11-1A0A0K0K1C0 115 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A0U1RQV5 110 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1W2PPB8 328 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 RPS10-NUDT3A0A1W2PQS6 291 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1W2PRS3 328 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 C1orf226A1L170 272 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 KIR3DP1A8MWS1 328 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 G3V3Y1 287 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 M0QZK8 103 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 WWP2O00308 870 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CHP2O43745 196 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 OR10H2O60403 315 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 SCO1O75880 301 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CPSF4O95639 269 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 C6orf47O95873 294 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TPOP07202 933 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ACSM4P0C7M7 580 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 LBPP18428 481 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 S1PR1P21453 382 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ME2P23368 584 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 TNFSF8P32971 234 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 PCGF2P35227 344 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 RFC3P40938 356 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CDKN2CP42773 168 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 CRATP43155 626 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ZFP36L2P47974 494 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 IGLV3-21P80748 117 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 EMX2Q04743 252 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF763Q0D2J5 394 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 MERTKQ12866 999 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 HSPB3Q12988 150 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GAGE1Q13065 139 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 MAB21L1Q13394 359 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 ART3Q13508 389 aa4.27□□□□□ -1.73
ATPAF1-203ENST00000460928 GK3PQ14409 553 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms