RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 RAB35Q15286 201 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 RSPO1Q2MKA7 263 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 Q5PR19 223 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 SLX4IPQ5VYV7 408 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 PLBD1Q6P4A8 553 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 CFAP77Q6ZQR2 320 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 LRP11Q86VZ4 500 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 ZNF511Q8NB15 262 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 OR1F12Q8NHA8 337 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 SLC7A6Q92536 515 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 MAP6Q96JE9 813 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 OR51B6Q9H340 312 aa17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 PNRC2Q9NPJ4 139 aaKnown RBP17.72■□□□□ 0.43
RPUSD3-210ENST00000460909 ANKRD65E5RJM6 399 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 PRR23D1E9PI22 279 aaPredicted RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 NGFP01138 241 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 ALPLP05186 524 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 PRR23D2P0DMB1 279 aaPredicted RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 ZNF250P15622 560 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 ZNF823P16415 610 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 PAICSP22234 425 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 POLR2IP36954 125 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 RPS27P42677 84 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 EVX1P49640 407 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 SNRPD2P62316 118 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 EFNB1P98172 346 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 TEX30Q5JUR7 227 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 ELFN2Q5R3F8 820 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 RFPL4BQ6ZWI9 263 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 CPOQ8IVL8 374 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 PQLC1Q8N2U9 271 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 OR6K6Q8NGW6 343 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 C4orf45Q96LM5 186 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 RBM4BQ9BQ04 359 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 CDADC1Q9BWV3 514 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 GABARAPL3Q9BY60 117 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 HDHD2Q9H0R4 259 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 MARCH7Q9H992 704 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 TVP23BQ9NYZ1 205 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 USE1Q9NZ43 259 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 MYEF2Q9P2K5 600 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 FZR1Q9UM11 496 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
RPUSD3-210ENST00000460909 FLNAP21333 2647 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 GLCEO94923 617 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 LCKP06239 509 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 DBHP09172 617 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 BMP4P12644 408 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 SLC2A5P22732 501 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 BLVRAP53004 296 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 SNAPC1Q16533 368 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 KRTAP27-1Q3LI81 207 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 C12orf73Q69YU5 71 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 RGS7BPQ6MZT1 257 aaPredicted RBP17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 TGIF2LYQ8IUE0 185 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 OR10S1Q8NGN2 331 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 OR1J1Q8NGS3 322 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 COQ7Q99807 217 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 TEX12Q9BXU0 123 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 OR51V1Q9H2C8 321 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 EIF3KQ9UBQ5 218 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 ENOPH1Q9UHY7 261 aa17.7■□□□□ 0.42
RPUSD3-210ENST00000460909 F8P00451 2351 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 IGLV3-9A0A075B6K5 115 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 EI24O14681 340 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 PRODHO43272 600 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 PRKYO43930 277 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 ENTPD1P49961 510 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 PPOXP50336 477 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 DNM1P46Q6ZS02 220 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 CXXC5Q7LFL8 322 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 BBS1Q8NFJ9 593 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 OR2AJ1Q8NGZ0 328 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 OTULINQ96BN8 352 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 MARS2Q96GW9 593 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 PLEKHA8Q96JA3 519 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 SYT3Q9BQG1 590 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 TBCCD1Q9NVR7 557 aa17.69■□□□□ 0.42
RPUSD3-210ENST00000460909 ZNF593O00488 134 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 CLPTM1O96005 669 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 GSTT1P30711 240 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 TMEM255AQ5JRV8 349 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 TMEM154Q6P9G4 183 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 TIGD4Q8IY51 512 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 CBR4Q8N4T8 237 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 ABHD4Q8TB40 342 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 SORCS2Q96PQ0 1159 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 DCLRE1CQ96SD1 692 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 PITX2Q99697 317 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 ELOVL3Q9HB03 270 aa17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 FBXO9Q9UK97 447 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-210ENST00000460909 E9PQ18 207 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 M0R129 80 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ABHD16AO95870 558 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ALDH3A2P51648 485 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 PPP1CBP62140 327 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 SLC35D3Q5M8T2 416 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 SPATA46Q5T0L3 261 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 ARL9Q6T311 187 aa17.67■□□□□ 0.42
RPUSD3-210ENST00000460909 DCXRQ7Z4W1 244 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms