RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 FAIMQ9NVQ4 179 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 GDF2Q9UK05 429 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-209ENST00000460573 ABCA4P78363 2273 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 VSTM5A8MXK1 200 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 DLGAP1O14490 977 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 RER1O15258 196 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 SYNGR3O43761 229 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 MPZL2O60487 215 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 NR4A1P22736 598 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 SNRPGP62308 76 aaKnown RBP19.43■□□□□ 0.7
C9orf3-209ENST00000460573 ECH1Q13011 328 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 CCDC92Q53HC0 331 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-209ENST00000460573 ELFN2Q5R3F8 820 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 SLC25A30Q5SVS4 291 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 TTC23Q5W5X9 447 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF544Q6NX49 715 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 UNQ6126/PRO20091Q6UXV3 157 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 IPCEF1Q8WWN9 437 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-209ENST00000460573 ZMYND19Q96E35 227 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-209ENST00000460573 DHRS9Q9BPW9 319 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 UBTD1Q9HAC8 227 aa19.43■□□□□ 0.7
C9orf3-209ENST00000460573 E7EQL1 145 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 M0R129 80 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 PCSK6P29122 969 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 HTR5AP47898 357 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 TMED1Q13445 227 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 MEDAGQ5VYS4 303 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 CORO6Q6QEF8 472 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 ARL9Q6T311 187 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 LYPD4Q6UWN0 246 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 ERI1Q8IV48 349 aaKnown RBP19.42■□□□□ 0.7
C9orf3-209ENST00000460573 LINC00346Q8IVM7 164 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 TIGD4Q8IY51 512 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 C1orf174Q8IYL3 243 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 OR1F12Q8NHA8 337 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 RFKQ969G6 155 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 COQ7Q99807 217 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 VCX3BQ9H321 246 aa19.42■□□□□ 0.7
C9orf3-209ENST00000460573 LOC100509620A0A075B734 347 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 C5orf49A4QMS7 147 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 CCDC182A6NF36 153 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 OR6C6A6NF89 314 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 H0YJX3 145 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 SPARCP09486 303 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 RAD52P43351 418 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 RPS23P62266 143 aaKnown RBP19.41■□□□□ 0.7
C9orf3-209ENST00000460573 HGFACQ04756 655 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 TGIF2LYQ8IUE0 185 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 DHRSXQ8N5I4 330 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF454Q8N9F8 522 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 OR6N2Q8NGY6 317 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 NEUROG1Q92886 237 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 DCLRE1CQ96SD1 692 aaKnown RBP19.41■□□□□ 0.7
C9orf3-209ENST00000460573 APOL4Q9BPW4 351 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 BCL2L14Q9BZR8 327 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 CXXC4Q9H2H0 198 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 HEATR1Q9H583 2144 aaKnown RBP19.41■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF442Q9H7R0 627 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 HAO2Q9NYQ3 351 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 EIF3KQ9UBQ5 218 aaKnown RBP19.41■□□□□ 0.7
C9orf3-209ENST00000460573 WARS2Q9UGM6 360 aaKnown RBP19.41■□□□□ 0.7
C9orf3-209ENST00000460573 CELSR1Q9NYQ6 3014 aa19.41■□□□□ 0.7
C9orf3-209ENST00000460573 PRRC2AP48634 2157 aaKnown RBP19.41■□□□□ 0.7
C9orf3-209ENST00000460573 ICMTO60725 284 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 CCL2P13500 99 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 CCNOP22674 350 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 APOBEC3AP31941 199 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-209ENST00000460573 NKX6-1P78426 367 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-209ENST00000460573 GGTLC2Q14390 218 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 DEFB113Q30KQ7 82 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 B3GLCTQ6Y288 498 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 CFAP77Q6ZQR2 320 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 RHOUQ7L0Q8 258 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 SLC16A9Q7RTY1 509 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 DPY19L4Q7Z388 723 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 DCXRQ7Z4W1 244 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 BCDIN3DQ7Z5W3 292 aaKnown RBP19.4■□□□□ 0.7
C9orf3-209ENST00000460573 SMAP2Q8WU79 429 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-209ENST00000460573 YIPF3Q9GZM5 350 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 CA10Q9NS85 328 aa19.4■□□□□ 0.7
C9orf3-209ENST00000460573 CADP27708 2225 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 SNTNA6NMZ2 147 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 ATE1O95260 518 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 HTR1FP30939 366 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 GLRXP35754 106 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 FABP6P51161 128 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 SNTB2Q13425 540 aaKnown RBP19.39■□□□□ 0.69
C9orf3-209ENST00000460573 OCLNQ16625 522 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 KRT80Q6KB66 452 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 FBXL14Q8N1E6 418 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 MBD6Q96DN6 1003 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 MAP6Q96JE9 813 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 ZNF582Q96NG8 517 aaPredicted RBP19.39■□□□□ 0.69
C9orf3-209ENST00000460573 ATF6BQ99941 703 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 ELOVL3Q9HB03 270 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.39■□□□□ 0.69
C9orf3-209ENST00000460573 HIVEP1P15822 2718 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 C2CD3Q4AC94 2353 aa19.39■□□□□ 0.69
C9orf3-209ENST00000460573 H0YAE9 185 aa19.38■□□□□ 0.69
C9orf3-209ENST00000460573 DANCRP0C864 163 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms