RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 RP2O75695 350 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 HIST1H1CP16403 213 aaKnown RBP13.75□□□□□ -0.21
COL7A1-203ENST00000459756 MPV17P39210 176 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 GPR6P46095 362 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-203ENST00000459756 CENPAP49450 140 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 ZNF81P51508 661 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 MMP15P51511 669 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 TEKQ02763 1124 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 ZNF770Q6IQ21 691 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-203ENST00000459756 OR6V1Q8N148 313 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 OR52L1Q8NGH7 329 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 OR4K13Q8NH42 304 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 YIPF5Q969M3 257 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 RACGAP1Q9H0H5 632 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 ZNF275Q9NSD4 429 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-203ENST00000459756 DECR2Q9NUI1 292 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 ATPIF1Q9UII2 106 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 POLR1DQ9Y2S0 133 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 CDH10Q9Y6N8 788 aa13.75□□□□□ -0.21
COL7A1-203ENST00000459756 KIAA1324LA8MWY0 1029 aaPredicted RBP13.74□□□□□ -0.21
COL7A1-203ENST00000459756 CCNB2O95067 398 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 TGFAP01135 160 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 GAAP10253 952 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 GSTM3P21266 225 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 TRIP10Q15642 601 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 ZMAT1Q5H9K5 638 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 FAM209AQ5JX71 171 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 OTPQ5XKR4 325 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 ZBTB46Q86UZ6 589 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 GJC3Q8NFK1 279 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 OR9Q2Q8NGE9 314 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 OR1F12Q8NHA8 337 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 GTF3AQ92664 365 aaKnown RBP13.74□□□□□ -0.21
COL7A1-203ENST00000459756 BEX2Q9BXY8 128 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 EGLN3Q9H6Z9 239 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 REEP1Q9H902 201 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 SRA1Q9HD15 236 aaKnown RBP13.74□□□□□ -0.21
COL7A1-203ENST00000459756 RPRD1BQ9NQG5 326 aaKnown RBP13.74□□□□□ -0.21
COL7A1-203ENST00000459756 IL20Q9NYY1 176 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
COL7A1-203ENST00000459756 GRIP1Q9Y3R0 1128 aa13.74□□□□□ -0.21
COL7A1-203ENST00000459756 OR6C68A6NDL8 312 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 RER1O15258 196 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 TPD52L2O43399 206 aaKnown RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 PPIHO43447 177 aaKnown RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 GPANK1O95872 356 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 GASTP01350 101 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 IFNA2P01563 188 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 IGHV1-46P01743 117 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 FAM157CP0CG43 387 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 RAP2AP10114 183 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 IL2RGP31785 369 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 CRYBB2P43320 205 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 HIST1H3AP68431 136 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 COX10Q12887 443 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 TRAP1Q12931 704 aaKnown RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 FLOT2Q14254 428 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 TSTQ16762 297 aaKnown RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 SLC36A3Q495N2 470 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 CCDC92Q53HC0 331 aaPredicted RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 TMEM255AQ5JRV8 349 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 CLEC12AQ5QGZ9 265 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 HIST2H3PS2Q5TEC6 136 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 OR2T5Q6IEZ7 315 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 HIST2H3AQ71DI3 136 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 AQP11Q8NBQ7 271 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 SLC26A10Q8NG04 563 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 OR52E2Q8NGJ4 325 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 OR2T29Q8NH02 315 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 C1orf159Q96HA4 380 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 COG8Q96MW5 612 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 DCLRE1CQ96SD1 692 aaKnown RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 DIRC2Q96SL1 478 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 SOX7Q9BT81 388 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 HDHD2Q9H0R4 259 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 SAP30LQ9HAJ7 183 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 KLHL21Q9UJP4 597 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 ZDHHC8Q9ULC8 765 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 SAMHD1Q9Y3Z3 626 aaKnown RBP13.73□□□□□ -0.21
COL7A1-203ENST00000459756 LHFPL6Q9Y693 200 aa13.73□□□□□ -0.21
COL7A1-203ENST00000459756 IGHV1-69-2A0A0G2JMI3 117 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 J3QW42 95 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 BHLHE40O14503 412 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 ACOT8O14734 319 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 CDC14BO60729 498 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 ADH4P08319 380 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 IGFBP5P24593 272 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 RGS6P49758 472 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL7A1-203ENST00000459756 PSG7Q13046 419 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 GK3PQ14409 553 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 MEP1BQ16820 701 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 MICAQ29983 383 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 SLC35F1Q5T1Q4 408 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 RASSF6Q6ZTQ3 369 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-203ENST00000459756 SPATA24Q86W54 205 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 LINC01356Q8N9X3 169 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms