RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ZNF540Q8NDQ6 660 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 OR5L1Q8NGL2 311 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 ABHD4Q8TB40 342 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 PLEKHA8Q96JA3 519 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 COX4I2Q96KJ9 171 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 RAB3IPQ96QF0 476 aaPredicted RBP13.88□□□□□ -0.19
CD28-203ENST00000458610 COQ7Q99807 217 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 RBM4Q9BWF3 364 aaKnown RBP13.88□□□□□ -0.19
CD28-203ENST00000458610 REG4Q9BYZ8 158 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 FN3KQ9H479 309 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 F8P00451 2351 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 CSMD2Q7Z408 3487 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 IGLV3-9A0A075B6K5 115 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 RER1O15258 196 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 SLC25A16P16260 332 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 PYCR1P32322 319 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 LIPAP38571 399 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 ACTR3P61158 418 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 ESRRGP62508 458 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 MEP1BQ16820 701 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 CCDC92Q53HC0 331 aaPredicted RBP13.87□□□□□ -0.19
CD28-203ENST00000458610 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 FAHD1Q6P587 224 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 TMEM154Q6P9G4 183 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 HS3ST5Q8IZT8 346 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 PARP8Q8N3A8 854 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 CENPNQ96H22 339 aaPredicted RBP13.87□□□□□ -0.19
CD28-203ENST00000458610 SORCS2Q96PQ0 1159 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 PITX2Q99697 317 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 PRRG3Q9BZD7 231 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 NMNAT2Q9BZQ4 307 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 CYSLTR2Q9NS75 346 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 TAAR3PQ9P1P4 343 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 CYB5R1Q9UHQ9 305 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 GRIP1Q9Y3R0 1128 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 LHFPL6Q9Y693 200 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 ITPR3Q14573 2671 aa13.87□□□□□ -0.19
CD28-203ENST00000458610 LOC390937A0A1W2PQ73 354 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 PRR23D1E9PI22 279 aaPredicted RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 SMAD7O15105 426 aaKnown RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 GPANK1O95872 356 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 IGHV3-13P01766 116 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 PRR23D2P0DMB1 279 aaPredicted RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 ZNF23P17027 643 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 SPI1P17947 270 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 WNT5AP41221 380 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 CRISP1P54107 249 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 CDK5Q00535 292 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 PCGF3Q3KNV8 242 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 MBNL2Q5VZF2 373 aaKnown RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 SLC18B1Q6NT16 456 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 LRP11Q86VZ4 500 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 ZNF101Q8IZC7 436 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 OR9Q1Q8NGQ5 310 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 SLC25A40Q8TBP6 338 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 OTULINQ96BN8 352 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 MARS2Q96GW9 593 aaKnown RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 HINT3Q9NQE9 182 aaKnown RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 CGGBP1Q9UFW8 167 aaPredicted RBP13.86□□□□□ -0.19
CD28-203ENST00000458610 FZR1Q9UM11 496 aa13.86□□□□□ -0.19
CD28-203ENST00000458610 CSMD1Q96PZ7 3565 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 PLSCR5A0PG75 271 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 RNF223E7ERA6 249 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 GGT2P36268 569 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 ALDH3B1P43353 468 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 ERVS71-1P61550 626 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 MSMPQ1L6U9 139 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 ZMAT1Q5H9K5 638 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 TEX30Q5JUR7 227 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 ACSM5Q6NUN0 579 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 CORO6Q6QEF8 472 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 AMIGO2Q86SJ2 522 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 IQCF1Q8N6M8 205 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 ZNF525Q8N782 197 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 OR6K6Q8NGW6 343 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 KLF14Q8TD94 323 aaPredicted RBP13.85□□□□□ -0.19
CD28-203ENST00000458610 UBASH3BQ8TF42 649 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 LRTOMTQ8WZ04 291 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 PTP4A1Q93096 173 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 APOBEC3DQ96AK3 386 aaPredicted RBP13.85□□□□□ -0.19
CD28-203ENST00000458610 OR2J1Q9GZK6 312 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 SLC25A19Q9HC21 320 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 KRT84Q9NSB2 600 aa13.85□□□□□ -0.19
CD28-203ENST00000458610 MRPL22Q9NWU5 206 aaKnown RBP13.85□□□□□ -0.19
CD28-203ENST00000458610 TVP23AA6NH52 213 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 CLPTM1O96005 669 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 NGFP01138 241 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 DAOP14920 347 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 ENTPD1P49961 510 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 DAPP51397 102 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 CARTPTQ16568 116 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 FAM209AQ5JX71 171 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 OTPQ5XKR4 325 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 LINC00346Q8IVM7 164 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 OR51L1Q8NGJ5 315 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 C10orf105Q8TEF2 133 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 SPTSSAQ969W0 71 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 ATF6BQ99941 703 aa13.84□□□□□ -0.19
CD28-203ENST00000458610 PIMREGQ9BSJ6 248 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms