RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CSF1P09603 554 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 DNASE1L1P49184 302 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 ZXDAP98168 799 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 SSBP1Q04837 148 aaKnown RBP14.85□□□□□ -0.03
CCDC43-202ENST00000457422 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 TRIM61Q5EBN2 209 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 OPN5Q6U736 354 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 CREB3L2Q70SY1 520 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 BEST4Q8NFU0 473 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 OR6X1Q8NH79 312 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 M1APQ8TC57 530 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 DACT3Q96B18 629 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-202ENST00000457422 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 MED30Q96HR3 178 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 C1orf198Q9H425 327 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 CENPMQ9NSP4 180 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 A0A087WZY1 265 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 C9J4A7 227 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 ICMTO60725 284 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 NDUFB6O95139 128 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 FAUP35544 74 aaKnown RBP14.85□□□□□ -0.03
CCDC43-202ENST00000457422 EIF1AXP47813 144 aaKnown RBP14.85□□□□□ -0.03
CCDC43-202ENST00000457422 VEGFCP49767 419 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 CLRN1P58418 232 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 FAAP20Q6NZ36 180 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 LUZP2Q86TE4 346 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 LYPD6Q86Y78 171 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 NKAIN3Q8N8D7 197 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 NTNG2Q96CW9 530 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 OXGR1Q96P68 337 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 OR10A4Q9H209 315 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 NOX3Q9HBY0 568 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 HSPB11Q9Y547 144 aa14.85□□□□□ -0.03
CCDC43-202ENST00000457422 PHF3Q92576 2039 aaKnown RBP14.84□□□□□ -0.03
CCDC43-202ENST00000457422 COL6A3P12111 3177 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 AQP7P3A6NL99 342 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 ZNF814B7Z6K7 855 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 ARPC1BO15143 372 aaKnown RBP14.84□□□□□ -0.03
CCDC43-202ENST00000457422 LDLRAD4O15165 306 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 SSNA1O43805 119 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 KDM4BO94953 1096 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 GABRA1P14867 456 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 SFTPDP35247 375 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 C1orf100Q5SVJ3 147 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 SLC23A3Q6PIS1 610 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 GTPBP8Q8N3Z3 284 aaPredicted RBP14.84□□□□□ -0.03
CCDC43-202ENST00000457422 DEFB123Q8N688 67 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 OR51A2Q8NGJ7 313 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 OR10S1Q8NGN2 331 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 HS3ST3B1Q9Y662 390 aa14.84□□□□□ -0.03
CCDC43-202ENST00000457422 FRYLO94915 3013 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 TRAV18A0A075B6X5 111 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 A0A1W2PPL8 197 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 AKR7A2O43488 359 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 LMX1BO60663 402 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 ACSM4P0C7M7 580 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 CAPZA1P52907 286 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 CAMK2DQ13557 499 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 HIST3H3Q16695 136 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 PCGF3Q3KNV8 242 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 GLYATL3Q5SZD4 288 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 SLC25A47Q6Q0C1 308 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 KLHL24Q6TFL4 600 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 GLDNQ6ZMI3 551 aaPredicted RBP14.83□□□□□ -0.03
CCDC43-202ENST00000457422 RHOUQ7L0Q8 258 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 ADGRE4PQ86SQ3 457 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 GPAT4Q86UL3 456 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 ELMOD2Q8IZ81 293 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 OR2Y1Q8NGV0 311 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 PTX4Q96A99 478 aa14.83□□□□□ -0.03
CCDC43-202ENST00000457422 NPDC1Q9NQX5 325 aaPredicted RBP14.83□□□□□ -0.03
CCDC43-202ENST00000457422 CGGBP1Q9UFW8 167 aaPredicted RBP14.83□□□□□ -0.03
CCDC43-202ENST00000457422 MRPS18BQ9Y676 258 aaKnown RBP14.83□□□□□ -0.03
CCDC43-202ENST00000457422 CFAP54Q96N23 3096 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 A0A0A6YYH2 397 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 A6NJ64 397 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 SULT1C2O00338 296 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 P2RY10O00398 339 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 TTRP02766 147 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 IL5P05113 134 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 CPN1P15169 458 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 KLK2P20151 261 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 PRSS3P35030 304 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 ZP1P60852 638 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 SNRPD2P62316 118 aaKnown RBP14.83□□□□□ -0.04
CCDC43-202ENST00000457422 SLC35A1P78382 337 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 TMEM176BQ3YBM2 270 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-202ENST00000457422 ZNF782Q6ZMW2 699 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-202ENST00000457422 C1orf210Q8IVY1 113 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 FOXRED1Q96CU9 486 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-202ENST00000457422 ANGPTL4Q9BY76 406 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 RHBDD3Q9Y3P4 386 aa14.83□□□□□ -0.04
CCDC43-202ENST00000457422 RAMP1O60894 148 aa14.82□□□□□ -0.04
CCDC43-202ENST00000457422 CARD17Q5XLA6 110 aa14.82□□□□□ -0.04
CCDC43-202ENST00000457422 TMPPEQ6ZT21 453 aa14.82□□□□□ -0.04
CCDC43-202ENST00000457422 OR4C16Q8NGL9 310 aa14.82□□□□□ -0.04
CCDC43-202ENST00000457422 GPX8Q8TED1 209 aa14.82□□□□□ -0.04
CCDC43-202ENST00000457422 ZNF431Q8TF32 576 aaPredicted RBP14.82□□□□□ -0.04
CCDC43-202ENST00000457422 ATG5Q9H1Y0 275 aa14.82□□□□□ -0.04
CCDC43-202ENST00000457422 SMOC1Q9H4F8 434 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms