RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 THEM5Q8N1Q8 247 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ARMC10Q8N2F6 343 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 AVL9Q8NBF6 648 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NLGN2Q8NFZ4 835 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MUCL1Q96DR8 90 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 PARD6GQ9BYG4 376 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NRIP3Q9NQ35 241 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TAC3Q9UHF0 121 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NPIPB9F8W1W9 429 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ADAM10O14672 748 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 IFNGP01579 166 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 RNH1P13489 461 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 RAB32Q13637 225 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ACTBL2Q562R1 376 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KRBOX4Q5JUW0 171 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM244Q5VVB8 128 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KIRREL2Q6UWL6 708 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 BEND4Q6ZU67 534 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 LANCL3Q6ZV70 420 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MARCH3Q86UD3 253 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ODF3L1Q8IXM7 274 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 GABRG1Q8N1C3 465 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 GTPBP8Q8N3Z3 284 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM156Q8N614 296 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 OR4D6Q8NGJ1 314 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ADAMTS17Q8TE56 1095 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NMNAT2Q9BZQ4 307 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 PTGES2Q9H7Z7 377 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 WFDC1Q9HC57 220 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TRIM36Q9NQ86 728 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 THAP10Q9P2Z0 257 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 WNT6Q9Y6F9 365 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NAV2Q8IVL1 2488 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TEX13DA0A0J9YY54 714 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF208O43345 1280 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ABLIM3O94929 683 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MPZL1O95297 269 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MT-ND4LP03901 98 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MT-ND5P03915 603 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 S100A8P05109 93 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SAGP10523 405 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF708P17019 499 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF3P17036 446 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 HOXB6P17509 224 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 EPHA1P21709 976 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CSNK1EP49674 416 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SPCS3P61009 180 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF177Q13360 481 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TSC22D1Q15714 1073 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPL2Q5T653 305 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF697Q5TEC3 545 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ARHGAP40Q5TG30 622 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ANXA8L1Q5VT79 327 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 AADACL3Q5VUY0 350 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KHDRBS2Q5VWX1 349 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM268Q5VZI3 342 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF385CQ66K41 422 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 RAB12Q6IQ22 244 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NXPE4Q6UWF7 544 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 STOML3Q8TAV4 291 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ADAMTS18Q8TE60 1221 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CDS1Q92903 461 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC41A3Q96GZ6 507 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KIRREL1Q96J84 757 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 C5orf66Q9H5L9 145 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SEC61A2Q9H9S3 476 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CRLF2Q9HC73 371 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SAGE1Q9NXZ1 904 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MED11Q9P086 117 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 APOBEC3BQ9UH17 382 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CLDN16Q9Y5I7 305 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CSAG2Q9Y5P2 127 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SELENOKQ9Y6D0 94 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CACNA1AO00555 2505 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 OR52A4PA6NMU1 304 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 BLOC1S5-TXNDC5H3BN57 136 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 LDLRAD4O15165 306 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC31A2O15432 143 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF749O43361 778 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 PRAF2O60831 178 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 MAP3K8P41279 467 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 STARP49675 285 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 LINC00310P59036 64 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CXADRP78310 365 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TGM3Q08188 693 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TMPRSS11FQ6ZWK6 438 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ACBD4Q8NC06 268 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 STEAP2Q8NFT2 490 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 MARCH1Q8TCQ1 289 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 HPSE2Q8WWQ2 592 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 FAM46BQ96A09 425 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM41AQ96HV5 264 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 NDC1Q9BTX1 674 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TOLLIPQ9H0E2 274 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 FBXO7Q9Y3I1 522 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 IER3IP1Q9Y5U9 82 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms