RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 MRPL24Q96A35 216 aaKnown RBP17.16■□□□□ 0.34
COL9A3-202ENST00000452372 DOK1Q99704 481 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 TEX12Q9BXU0 123 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 BCL2L14Q9BZR8 327 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 PLEK2Q9NYT0 353 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 CYB5R1Q9UHQ9 305 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 FBXO9Q9UK97 447 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-202ENST00000452372 OAZ3Q9UMX2 235 aa17.16■□□□□ 0.34
COL9A3-202ENST00000452372 RER1O15258 196 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 SURF4O15260 269 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 SYNGR3O43761 229 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 ICMTO60725 284 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 NDUFS7O75251 213 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 GYPBP06028 91 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 CLUP10909 449 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 ZNF823P16415 610 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 GGT2P36268 569 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 WNT5AP41221 380 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 RAB35Q15286 201 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 TMEM236Q5W0B7 351 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 ICA1LQ8NDH6 482 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 CDADC1Q9BWV3 514 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 OSBPL10Q9BXB5 764 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 MRPL37Q9BZE1 423 aaKnown RBP17.15■□□□□ 0.34
COL9A3-202ENST00000452372 EIF3KQ9UBQ5 218 aaKnown RBP17.15■□□□□ 0.34
COL9A3-202ENST00000452372 ATPIF1Q9UII2 106 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 KCNG2Q9UJ96 466 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 ABCA1O95477 2261 aa17.15■□□□□ 0.34
COL9A3-202ENST00000452372 OR6C6A6NF89 314 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 FAM183AA6NL82 134 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 MITFO75030 526 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 IGHV4-39P01824 125 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 PAICSP22234 425 aaKnown RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 FMO3P31513 532 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 HTR5AP47898 357 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 BLVRAP53004 296 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 GABPB1Q06547 395 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 PTGES3Q15185 160 aaKnown RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 LINC01590Q5TEZ4 76 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 RGS7BPQ6MZT1 257 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 SLC18B1Q6NT16 456 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 CORO6Q6QEF8 472 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 UNQ6126/PRO20091Q6UXV3 157 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 ZNF101Q8IZC7 436 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 OR1F12Q8NHA8 337 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 HCAR1Q9BXC0 346 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 OR51B6Q9H340 312 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 BARX1Q9HBU1 254 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 S100A14Q9HCY8 104 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 ENOPH1Q9UHY7 261 aa17.14■□□□□ 0.33
COL9A3-202ENST00000452372 TMEFF2Q9UIK5 374 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 GDF2Q9UK05 429 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-202ENST00000452372 TVP23AA6NH52 213 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 SAC3D1A6NKF1 404 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 LCKP06239 509 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 ZNF250P15622 560 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 PPP2R2BQ00005 443 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 ELFN2Q5R3F8 820 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 ARL9Q6T311 187 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 PRIMA1Q86XR5 153 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 LINC00346Q8IVM7 164 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 C1orf174Q8IYL3 243 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 OR1J1Q8NGS3 322 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 OR2AJ1Q8NGZ0 328 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 C4orf45Q96LM5 186 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 COQ7Q99807 217 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 HDHD2Q9H0R4 259 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 MED20Q9H944 212 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 ELOVL3Q9HB03 270 aa17.13■□□□□ 0.33
COL9A3-202ENST00000452372 PRR23D1E9PI22 279 aaPredicted RBP17.12■□□□□ 0.33
COL9A3-202ENST00000452372 PRR23D2P0DMB1 279 aaPredicted RBP17.12■□□□□ 0.33
COL9A3-202ENST00000452372 IGFBP5P24593 272 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 PPOXP50336 477 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 ERVS71-1P61550 626 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 SNAPC1Q16533 368 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 ZSCAN26Q16670 478 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 PCK2Q16822 640 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 TEX30Q5JUR7 227 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 PLBD1Q6P4A8 553 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 LYPD4Q6UWN0 246 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 LRP11Q86VZ4 500 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 ZNF511Q8NB15 262 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 SLC7A6Q92536 515 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 OTULINQ96BN8 352 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 PLEKHA8Q96JA3 519 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 DCLRE1CQ96SD1 692 aaKnown RBP17.12■□□□□ 0.33
COL9A3-202ENST00000452372 CIB1Q99828 191 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 RBM4BQ9BQ04 359 aaKnown RBP17.12■□□□□ 0.33
COL9A3-202ENST00000452372 SYT3Q9BQG1 590 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 TBCCD1Q9NVR7 557 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 TVP23BQ9NYZ1 205 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 DUSP13Q9UII6 198 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 FZR1Q9UM11 496 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 COMMD3-BMI1R4GMX3 469 aa17.12■□□□□ 0.33
COL9A3-202ENST00000452372 IGLV3-9A0A075B6K5 115 aa17.11■□□□□ 0.33
COL9A3-202ENST00000452372 GLCEO94923 617 aa17.11■□□□□ 0.33
COL9A3-202ENST00000452372 NGFP01138 241 aa17.11■□□□□ 0.33
COL9A3-202ENST00000452372 EPHA2P29317 976 aa17.11■□□□□ 0.33
COL9A3-202ENST00000452372 KRTAP1-1Q07627 177 aa17.11■□□□□ 0.33
COL9A3-202ENST00000452372 TNK1Q13470 666 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms