RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ZNF730Q6ZMV8 503 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 PTCHD4Q6ZW05 846 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 RRM2BQ7LG56 351 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 NUFIP2Q7Z417 695 aaKnown RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CNEP1R1Q8N9A8 125 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 RELL2Q8NC24 303 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 TMEM163Q8TC26 289 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 ACOT11Q8WXI4 607 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 KCTD7Q96MP8 289 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 DPCDQ9BVM2 203 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF416Q9BWM5 594 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 SHARPINQ9H0F6 387 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 MED9Q9NWA0 146 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 B3GAT1Q9P2W7 334 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 LSM2Q9Y333 95 aaKnown RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 MED31Q9Y3C7 131 aa8.73□□□□□ -1.01
CCDC171-203ENST00000449575 KLF2Q9Y5W3 355 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-203ENST00000449575 CLEC18AA5D8T8 446 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MS4A18H0YCH9 400 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 CYTIPO60759 359 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TMIGD3P0DMS9 266 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-203ENST00000449575 RASGEF1BQ0VAM2 473 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 FHL1Q13642 323 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MS4A18Q3C1V0 323 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MZT2AQ6P582 158 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 CLEC18BQ6UXF7 455 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TFAP2EQ6VUC0 442 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 CFAP77Q6ZQR2 320 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MRGPRGQ86SM5 289 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TIGD4Q8IY51 512 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 CLEC18CQ8NCF0 446 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 PROKR2Q8NFJ6 384 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 OR4K5Q8NGD3 323 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 OR9Q2Q8NGE9 314 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 OR5T2Q8NGG2 359 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 OR52H1Q8NGJ2 320 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 OR4C15Q8NGM1 316 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 BPIFA2Q96DR5 249 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 FAM46AQ96IP4 442 aaKnown RBP8.72□□□□□ -1.01
CCDC171-203ENST00000449575 KCNJ15Q99712 375 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 SOSTQ9BQB4 213 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 C12orf49Q9H741 205 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 PPP1R3EQ9H7J1 279 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TXNL4BQ9NX01 149 aaKnown RBP8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TAS2R16Q9NYV7 291 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF222Q9UK12 451 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 PKDREJQ9NTG1 2253 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 BAHCC1Q9P281 2608 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 NBPF19A0A087WUL8 3843 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 A0A1W2PNV4 684 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 A0A1W2PPL8 197 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 NKX2-6A6NCS4 301 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 AQP7P3A6NL99 342 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 ASAH2BP0C7U1 165 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 RBM34P42696 430 aaKnown RBP8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MXD1Q05195 221 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MICAQ29983 383 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 RIPPLY2Q5TAB7 128 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 PLBD1Q6P4A8 553 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 MBOAT2Q6ZWT7 520 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 OVCH2Q7RTZ1 564 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 ZER1Q7Z7L7 766 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 ZNF385AQ96PM9 386 aaKnown RBP8.72□□□□□ -1.01
CCDC171-203ENST00000449575 NANSQ9NR45 359 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TAS2R5Q9NYW4 299 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 GSTK1Q9Y2Q3 226 aa8.72□□□□□ -1.01
CCDC171-203ENST00000449575 NOSIPQ9Y314 301 aaKnown RBP8.72□□□□□ -1.01
CCDC171-203ENST00000449575 TRAV27A0A087WT01 109 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 WIPF3A6NGB9 483 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 C11orf98E9PRG8 122 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 OR2T1O43869 369 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 FZD7O75084 574 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 APEX1P27695 318 aaKnown RBP8.71□□□□□ -1.01
CCDC171-203ENST00000449575 GRNP28799 593 aaKnown RBP8.71□□□□□ -1.01
CCDC171-203ENST00000449575 AGTR1P30556 359 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 OMPP47874 163 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 BLVRAP53004 296 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 IL18Q14116 193 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 SLC17A1Q14916 467 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 FCN2Q15485 313 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 ZIC4Q8N9L1 334 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 OR13C2Q8NGS9 318 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 STARD4Q96DR4 205 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 HS6ST2Q96MM7 605 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 SLC19A3Q9BZV2 496 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 ENKD1Q9H0I2 346 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 CHST11Q9NPF2 352 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 LRBAP50851 2863 aa8.71□□□□□ -1.01
CCDC171-203ENST00000449575 C7orf66A4D0T2 115 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 FAM90A27PA6NNH2 459 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 BLOC1S5-TXNDC5H3BN57 136 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 LALBAP00709 142 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 PLGP00747 810 aaPredicted RBP8.71□□□□□ -1.02
CCDC171-203ENST00000449575 POU2F1P14859 743 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 RAC2P15153 192 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 HMGA2P52926 109 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 LGALS3BPQ08380 585 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.02
CCDC171-203ENST00000449575 SNAPC1Q16533 368 aa8.71□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF57Q68EA5 555 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms