RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CD96P40200 585 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 PRSS12P56730 875 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 RIN1Q13671 783 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 WBP2NLQ6ICG8 309 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 LDLRAD3Q86YD5 345 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 SUMF2Q8NBJ7 301 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 APOBEC4Q8WW27 367 aaKnown RBP11.23□□□□□ -0.61
UBE3B-204ENST00000449510 WDR34Q96EX3 536 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 PGAM5Q96HS1 289 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 PRSS27Q9BQR3 290 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 DHCR7Q9UBM7 475 aaKnown RBP11.23□□□□□ -0.61
UBE3B-204ENST00000449510 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 IGKV1-8A0A0C4DH67 115 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 FAM157BP0CG42 384 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 CD53P19397 219 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 BLVRBP30043 206 aaPredicted RBP11.23□□□□□ -0.61
UBE3B-204ENST00000449510 PPIAP62937 165 aaKnown RBP11.23□□□□□ -0.61
UBE3B-204ENST00000449510 ACKR1Q16570 336 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 FAM78AQ5JUQ0 283 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 DNM1P34Q6PK57 102 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 ETV3LQ6ZN32 361 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 PBX4Q9BYU1 374 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 OR10A5Q9H207 317 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 MED29Q9NX70 200 aa11.23□□□□□ -0.61
UBE3B-204ENST00000449510 A0A0G2JK05 382 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 RNASEK-C17orf49H0YIS7 233 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 NKX6-1P78426 367 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 ATPAF1Q5TC12 328 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 NAXDQ8IW45 347 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 MITD1Q8WV92 249 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 GDF15Q99988 308 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 SOSTQ9BQB4 213 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 PITHD1Q9GZP4 211 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 PRODH2Q9UF12 536 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 HMSDA8MTL9 139 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 ZIC2O95409 532 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 IL9P15248 144 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 EPHA1P21709 976 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 OPRM1P35372 400 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 ZNF93P35789 620 aaPredicted RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 CLRN1P58418 232 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 PPP1CAP62136 330 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 HAGHQ16775 308 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 PRAMEF8Q5VWM4 474 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 PRAMEF7Q5VXH5 474 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 GLIPR1L1Q6UWM5 242 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 VN1R4Q7Z5H5 301 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 ADGRE4PQ86SQ3 457 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 MCATQ8IVS2 390 aaKnown RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 SULF2Q8IWU5 870 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 C17orf78Q8N4C9 275 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 OR6K3Q8NGY3 331 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 LPAR4Q99677 370 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 UBQLN4Q9NRR5 601 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 A0A0B4J2E0 115 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 A0A1B0GX12 115 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 A0A1W2PPV9 198 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 TUBAL3A6NHL2 446 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 RHPN2P1A8MT19 583 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 GP1BAP07359 652 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 DPP4P27487 766 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 IKZF1Q13422 519 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 GNMTQ14749 295 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 RPL7L1Q6DKI1 246 aaKnown RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 SGPP2Q8IWX5 399 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 MRPL43Q8N983 215 aaKnown RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 OR5D14Q8NGL3 314 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 C16orf52Q8NHV5 167 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 RLN3Q8WXF3 142 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 SLC5A7Q9GZV3 580 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 ENTPD2Q9Y5L3 495 aa11.22□□□□□ -0.61
UBE3B-204ENST00000449510 MDC1Q14676 2089 aaKnown RBP11.22□□□□□ -0.61
UBE3B-204ENST00000449510 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 BET1O15155 118 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 NUDT21O43809 227 aaKnown RBP11.21□□□□□ -0.61
UBE3B-204ENST00000449510 BRINP1O60477 761 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 EML2O95834 649 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 WNT11O96014 354 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 PNMTP11086 282 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 CPN1P15169 458 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 ALDH3B1P43353 468 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 GAS1P54826 345 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 UBE2KP61086 200 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 S100A12P80511 92 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 FAM53BQ14153 422 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 FCRL6Q6DN72 434 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 TANGO2Q6ICL3 276 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 CLCC1Q96S66 551 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 OR52A1Q9UKL2 312 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 KIF26BQ2KJY2 2108 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 UMAD1C9J7I0 102 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 OGG1O15527 345 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 GREM1O60565 184 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 TBX6O95947 436 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-204ENST00000449510 RPA2P15927 270 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 ADRA2CP18825 462 aa11.21□□□□□ -0.61
UBE3B-204ENST00000449510 GJA4P35212 333 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms