RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 GNALP38405 381 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
ERCC3-203ENST00000445889 RIPPLY1Q0D2K3 151 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 OR2I1PQ8NGU4 316 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 MESP1Q9BRJ9 268 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 C1orf198Q9H425 327 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PTGES2Q9H7Z7 377 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 MBD2Q9UBB5 411 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 CKLFQ9UBR5 152 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PRELID3BQ9Y3B1 194 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF175Q9Y473 711 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM14AQ9Y6G1 99 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 TCRBV21S2A2A0A5A6 115 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 C5orf51A6NDU8 294 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM127O75204 238 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 IL13RA1P78552 427 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 MANEAQ5SRI9 462 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FNDC7Q5VTL7 733 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 SHEQ5VZ18 495 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 SLC18B1Q6NT16 456 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TTLL10Q6ZVT0 673 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FJX1Q86VR8 437 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM200AQ86VY9 491 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 MRGPRFQ96AM1 343 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TGM7Q96PF1 710 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 DNTTIP1Q9H147 329 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 ALX4Q9H161 411 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 GMEB2Q9UKD1 530 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FRYLO94915 3013 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 OR6C76A6NM76 312 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 BCL2L11O43521 198 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 ATG12O94817 140 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 ERCC1P07992 297 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 SERTAD2Q14140 314 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PAN3Q58A45 887 aaKnown RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PABPC1L2AQ5JQF8 200 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM71Q6P5X7 295 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 HAGHLQ6PII5 290 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PAPD4Q6PIY7 484 aaKnown RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 RLN3Q8WXF3 142 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 CPNE2Q96FN4 548 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 GABRG3Q99928 467 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 SLC25A21Q9BQT8 299 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PURGQ9UJV8 347 aaKnown RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 IGKV1D-43A0A0B4J1Z2 117 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 OR14I1A6ND48 311 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 C5orf67F2Z3F1 127 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PMP2P02689 132 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PGAM2P15259 253 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 HRH1P35367 487 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 ARRB1P49407 418 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PRKXP51817 358 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 RIDAP52758 137 aaKnown RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FGL1Q08830 312 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PRTGQ2VWP7 1150 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FAM166AQ6J272 317 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 LDLRAD3Q86YD5 345 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM229BQ8NBD8 167 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 RNF128Q8TEB7 428 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 THAP3Q8WTV1 239 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FGGYQ96C11 551 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 SELENOIQ9C0D9 397 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 GAREM1Q9H706 876 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-203ENST00000445889 FREM2Q5SZK8 3169 aa12.75□□□□□ -0.37
ERCC3-203ENST00000445889 A0A0B4J2A0 478 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 ABCD4O14678 606 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CD2P06729 351 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 ADCYAP1P18509 176 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CD1CP29017 333 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CASRP41180 1078 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 SLC37A1P57057 533 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.74□□□□□ -0.37
ERCC3-203ENST00000445889 DCXRQ7Z4W1 244 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 INO80EQ8NBZ0 244 aaPredicted RBP12.74□□□□□ -0.37
ERCC3-203ENST00000445889 ASB12Q8WXK4 309 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 EMC6Q9BV81 110 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CNTD2Q9H8S5 307 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 OBP2AQ9NY56 170 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 SHPKQ9UHJ6 478 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 SLC5A6Q9Y289 635 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 YBX2Q9Y2T7 364 aaKnown RBP12.74□□□□□ -0.37
ERCC3-203ENST00000445889 LOC107986453A0A1B0GWG9 222 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 OR2F2O95006 317 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 TXNDC12O95881 172 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CD8AP01732 235 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 AKT2P31751 481 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 CD96P40200 585 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 EFNA3P52797 238 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 OR2F1Q13607 317 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
ERCC3-203ENST00000445889 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms