RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ZDHHC8Q9ULC8 765 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 YBX2Q9Y2T7 364 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 A0A1B0GWJ7 208 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR5H15A6NDH6 313 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR5H1A6NKK0 313 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GAPDHP04406 335 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 DHPSP49366 369 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 ABHD17CQ6PCB6 329 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 USP50Q70EL3 339 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 OR4A4PQ8NGN8 299 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RPS4Y2Q8TD47 263 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ALG14Q96F25 216 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NIPSNAP3BQ9BS92 247 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 DDA1Q9BW61 102 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 POLR1DQ9Y2S0 133 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 HEATR5AQ86XA9 2040 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TGIF1Q15583 401 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 COMMD2Q86X83 199 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 BMPERQ8N8U9 685 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 WFDC5Q8TCV5 224 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NPRL2Q8WTW4 380 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 DTD2Q96FN9 168 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 IL36AQ9UHA7 158 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 HSPA12AO43301 675 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SYT7O43581 403 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 CRTAPO75718 401 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 ZNF888P0CJ79 500 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 SLC11A1P49279 550 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 DUSP8Q13202 625 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GAMTQ14353 236 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NFATC4Q14934 902 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 PHF19Q5T6S3 580 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SLC39A5Q6ZMH5 540 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 RASD2Q96D21 266 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 MOGAT1Q96PD6 335 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 CMKLR1Q99788 373 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 CABLES2Q9BTV7 478 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TRAV8-7A0A075B6U6 113 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 BRINP1O60477 761 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 BPNT1O95861 308 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 PNMTP11086 282 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 ID4P47928 161 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 GATMP50440 423 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SCAND1P57086 179 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 MIDNQ504T8 468 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 BTNL8Q6UX41 500 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 DCBLD2Q96PD2 775 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 MESP1Q9BRJ9 268 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 DKKL1Q9UK85 242 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 SLC45A1Q9Y2W3 748 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 B3GALT1Q9Y5Z6 326 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 NOTCH3Q9UM47 2321 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TAS2R46P59540 309 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 Q6ZNB5 142 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 PLPP7Q8NBV4 271 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 HPSE2Q8WWQ2 592 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 MTIF3Q9H2K0 278 aaKnown RBP4.55□□□□□ -1.68
HERC1-201ENST00000443617 LMAN1LQ9HAT1 526 aa4.55□□□□□ -1.68
HERC1-201ENST00000443617 TRPM6Q9BX84 2022 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 C1QTNF3-AMACRE9PGA6 284 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 IL2RAP01589 272 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC48A1Q6P1K1 146 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 RERGQ96A58 199 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 LAT2Q9GZY6 243 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CGGBP1Q9UFW8 167 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 C19orf53Q9UNZ5 99 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 PTBP3O95758 552 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 CSTBP04080 98 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 PRNPP04156 253 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 GXYLT1Q4G148 440 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 Q6ZRG5 221 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NPEPL1Q8NDH3 523 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ZNF461Q8TAF7 563 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC25A44Q96H78 314 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 TMED3Q9Y3Q3 217 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 FITM1A5D6W6 292 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 FTCDNL1E5RQL4 147 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CRABP1P29762 137 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CTXN1P60606 82 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC25A24Q6NUK1 477 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 MAMDC2Q7Z304 686 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 OR13C8Q8NGS7 320 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 EGLN1Q9GZT9 426 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 CNOT1A5YKK6 2376 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 NPIPA5A0A0B4J1W7 369 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 A0A1B0GTH9 108 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NPIPA7E9PJI5 369 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NPIPA8P0DM63 369 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 ADRA2CP18825 462 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 NANOS3P60323 173 aaKnown RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC17A1Q14916 467 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 TAF9Q16594 264 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 DUSP5Q16690 384 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 HAGHQ16775 308 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 GFI1BQ5VTD9 330 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 DMRTC2Q8IXT2 367 aaPredicted RBP4.54□□□□□ -1.68
HERC1-201ENST00000443617 SLC26A1Q9H2B4 701 aa4.54□□□□□ -1.68
HERC1-201ENST00000443617 RBFOX3A6NFN3 312 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms