RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CCDC92Q53HC0 331 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-211ENST00000443563 TEX30Q5JUR7 227 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 TMEM236Q5W0B7 351 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 SLC18B1Q6NT16 456 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 PQLC1Q8N2U9 271 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 OR1J1Q8NGS3 322 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 OR1F12Q8NHA8 337 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
HDAC6-211ENST00000443563 C4orf45Q96LM5 186 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 PITX2Q99697 317 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 CIB1Q99828 191 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 GABARAPL3Q9BY60 117 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 MRPL22Q9NWU5 206 aaKnown RBP9.34□□□□□ -0.91
HDAC6-211ENST00000443563 TVP23BQ9NYZ1 205 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 USE1Q9NZ43 259 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 TMEFF2Q9UIK5 374 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-211ENST00000443563 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 CREBBPQ92793 2442 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 ITPR3Q14573 2671 aa9.34□□□□□ -0.91
HDAC6-211ENST00000443563 TVP23AA6NH52 213 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 FAM183AA6NL82 134 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 J3QW42 95 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 RER1O15258 196 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 GPRIN2O60269 458 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 BAG2O95816 211 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 MT-ND5P03915 603 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 ALPLP05186 524 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 CLUP10909 449 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF250P15622 560 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 GSTT1P30711 240 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 GCH1P30793 250 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 GGT2P36268 569 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 KLF3P57682 345 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-211ENST00000443563 MST1LQ2TV78 715 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF718Q3SXZ3 478 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 KLHL12Q53G59 568 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 Q5PR19 223 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 LCN1P1Q5VSP4 162 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 SLX4IPQ5VYV7 408 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 PLBD1Q6P4A8 553 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 CXXC5Q7LFL8 322 aaKnown RBP9.33□□□□□ -0.92
HDAC6-211ENST00000443563 SHFQ7M4L6 423 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 CPOQ8IVL8 374 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 PAQR4Q8N4S7 273 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-211ENST00000443563 OR51L1Q8NGJ5 315 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 OR5L1Q8NGL2 311 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 SYNPRQ8TBG9 265 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 PTP4A1Q93096 173 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 INTS14Q96SY0 518 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 ATF6BQ99941 703 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 OR51V1Q9H2C8 321 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 MS4A5Q9H3V2 200 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 RIBC2Q9H4K1 309 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 MED20Q9H944 212 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 DYNLRB1Q9NP97 96 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 TBCCD1Q9NVR7 557 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 SLCO1C1Q9NYB5 712 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 H2AFY2Q9P0M6 372 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-211ENST00000443563 GDF2Q9UK05 429 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-211ENST00000443563 COMMD3-BMI1R4GMX3 469 aa9.33□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF593O00488 134 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 EI24O14681 340 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 MITFO75030 526 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 SPARCP09486 303 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 WNT5AP41221 380 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 NUDT6P53370 316 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 TPTEP56180 551 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 CDC42P60953 191 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 RPS7P62081 194 aaKnown RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 PCK2Q16822 640 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 OTPQ5XKR4 325 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 C12orf73Q69YU5 71 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 CORO6Q6QEF8 472 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 CFAP77Q6ZQR2 320 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 ZBTB49Q6ZSB9 765 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 ERI1Q8IV48 349 aaKnown RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 LINC00346Q8IVM7 164 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF511Q8NB15 262 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 ABHD4Q8TB40 342 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 SNX33Q8WV41 574 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 ZNRF4Q8WWF5 429 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 SPTSSAQ969W0 71 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 EME1Q96AY2 570 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 DOK1Q99704 481 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 VRK1Q99986 396 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 HCAR1Q9BXC0 346 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 MRPL37Q9BZE1 423 aaKnown RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 RAB1BQ9H0U4 201 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 OR51B6Q9H340 312 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 WDR76Q9H967 626 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 MARCH7Q9H992 704 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 HINT3Q9NQE9 182 aaKnown RBP9.32□□□□□ -0.92
HDAC6-211ENST00000443563 DUSP13Q9UII6 198 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 GRIP1Q9Y3R0 1128 aa9.32□□□□□ -0.92
HDAC6-211ENST00000443563 IGLV3-9A0A075B6K5 115 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 A0A1W2PPW3 197 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TMEM129A0AVI4 362 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF878C9JN71 531 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 M0R233 179 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TLX2O43763 284 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms