RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 C20orf204Q6ZNR8 217 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 ERI1Q8IV48 349 aaKnown RBP13.82□□□□□ -0.2
USP39-205ENST00000442708 ALDH16A1Q8IZ83 802 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 ZNF101Q8IZC7 436 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 GJC3Q8NFK1 279 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 OR1F12Q8NHA8 337 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 TMEM171Q8WVE6 324 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 NRG4Q8WWG1 115 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 TEAD3Q99594 435 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 PITX2Q99697 317 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 CDADC1Q9BWV3 514 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 PRRG3Q9BZD7 231 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 OR51B6Q9H340 312 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 RNPEPL1Q9HAU8 725 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 CDH20Q9HBT6 801 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 FAM118AQ9NWS6 357 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 KCNG2Q9UJ96 466 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 NDRG4Q9ULP0 352 aaKnown RBP13.82□□□□□ -0.2
USP39-205ENST00000442708 LAMP3Q9UQV4 416 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 CSMD1Q96PZ7 3565 aa13.82□□□□□ -0.2
USP39-205ENST00000442708 TTKP33981 857 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 GDI2P50395 445 aaKnown RBP13.81□□□□□ -0.2
USP39-205ENST00000442708 KEAP1Q14145 624 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 SLC35D3Q5M8T2 416 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 ELFN2Q5R3F8 820 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 C11orf71Q6IPW1 123 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 DCXRQ7Z4W1 244 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 DTX2Q86UW9 622 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 OR1J2Q8NGS2 313 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 OR2AJ1Q8NGZ0 328 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 FAM81AQ8TBF8 368 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 ST7LQ8TDW4 575 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 INTS14Q96SY0 518 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 AMELYQ99218 206 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 CCL19Q99731 98 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 TRAF4Q9BUZ4 470 aaPredicted RBP13.81□□□□□ -0.2
USP39-205ENST00000442708 AASSQ9UDR5 926 aa13.81□□□□□ -0.2
USP39-205ENST00000442708 MAP1AP78559 2803 aaPredicted RBP13.81□□□□□ -0.2
USP39-205ENST00000442708 OTOGQ6ZRI0 2925 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 TMEM129A0AVI4 362 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 NGFP01138 241 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 APOBEC3AP31941 199 aaPredicted RBP13.8□□□□□ -0.2
USP39-205ENST00000442708 NAA10P41227 235 aaPredicted RBP13.8□□□□□ -0.2
USP39-205ENST00000442708 BLVRAP53004 296 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 HCCSP53701 268 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 UCP2P55851 309 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 RPS7P62081 194 aaKnown RBP13.8□□□□□ -0.2
USP39-205ENST00000442708 SLC34A1Q06495 639 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 KRTAP27-1Q3LI81 207 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 NXNL2Q5VZ03 156 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 ZNF544Q6NX49 715 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 RFPL4BQ6ZWI9 263 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 MEPCEQ7L2J0 689 aaKnown RBP13.8□□□□□ -0.2
USP39-205ENST00000442708 DPY19L4Q7Z388 723 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 OR6N2Q8NGY6 317 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
USP39-205ENST00000442708 ZNF442Q9H7R0 627 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 SMPD3Q9NY59 655 aaPredicted RBP13.8□□□□□ -0.2
USP39-205ENST00000442708 DNAJC27Q9NZQ0 273 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 FZR1Q9UM11 496 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 KLHDC2Q9Y2U9 406 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 ARFGEF3Q5TH69 2177 aa13.8□□□□□ -0.2
USP39-205ENST00000442708 OVOL3O00110 214 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 ICMTO60725 284 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 SMPD2O60906 423 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 MRPL3P09001 348 aaKnown RBP13.79□□□□□ -0.2
USP39-205ENST00000442708 OR4A8P0C604 315 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 ANOS1P23352 680 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 DNASE1P24855 282 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 PCSK6P29122 969 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 CDC42P60953 191 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 GALK2Q01415 458 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 TMEM255AQ5JRV8 349 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 NAA40Q86UY6 237 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 LRP11Q86VZ4 500 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 FBXL14Q8N1E6 418 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 MUC15Q8N387 334 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 PACRGLQ8N7B6 248 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 OR8J1Q8NGP2 316 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 NINJ1Q92982 152 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 C4orf45Q96LM5 186 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 COQ7Q99807 217 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 HDHD2Q9H0R4 259 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 POFUT1Q9H488 388 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 ATPIF1Q9UII2 106 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 GMPPBQ9Y5P6 360 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 CCDC168Q8NDH2 2452 aa13.79□□□□□ -0.2
USP39-205ENST00000442708 LOC100130705A0A1B0GUX0 176 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 H0YHG0 523 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 SLC16A6O15403 523 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 GABRB1P18505 474 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 GLRXP35754 106 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 SERPINF1P36955 418 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 EIF2B1Q14232 305 aaKnown RBP13.78□□□□□ -0.2
USP39-205ENST00000442708 GGTLC2Q14390 218 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 SWI5Q1ZZU3 235 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 SPATA46Q5T0L3 261 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 SPATC1Q76KD6 591 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 ENTHD1Q8IYW4 607 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 MBD6Q96DN6 1003 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms