RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ZFHX3Q15911 3703 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SLC35F4A4IF30 521 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 KIAA1324LA8MWY0 1029 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 AQP8O94778 261 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CDK1P06493 297 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 ARSBP15848 533 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CPEP16870 476 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 HOXB9P17482 250 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CDKN2CP42773 168 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 OR3A2P47893 321 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 RAB25P57735 213 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 RAC3P60763 192 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 ZNF91Q05481 1191 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 LOXL1Q08397 574 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 RGNQ15493 299 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 RFX4Q33E94 735 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 TIMM23BQ5SRD1 257 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 KLHL17Q6TDP4 642 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 TMEM107Q6UX40 140 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 C17orf107Q6ZR85 190 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 ZNF550Q7Z398 422 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 RNF130Q86XS8 419 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 OR4N2Q8NGD1 307 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SMAP2Q8WU79 429 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SLC25A43Q8WUT9 341 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 KISS1RQ969F8 398 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 MDFIQ99750 246 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 MIXL1Q9H2W2 232 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 MYOZ1Q9NP98 299 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 NLKQ9UBE8 527 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 PSORS1C1Q9UIG5 152 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SPIN1Q9Y657 262 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 HIVEP2P31629 2446 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 AKAP6Q13023 2319 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 hCG_1807616A0A1W2PRN6 198 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 MFSD2BA6NFX1 497 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 DNASE2O00115 360 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 GTPBP1O00178 669 aaKnown RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 LGALS8O00214 317 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 NTN1O95631 604 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 FAM157CP0CG43 387 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 ACAA2P42765 397 aaKnown RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 MEOX2P50222 304 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 P2RX1P51575 399 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 HBA1P69905 142 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CAMK2DQ13557 499 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CHRFAM7AQ494W8 412 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 OR5M10Q6IEU7 315 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 FAM131AQ6UXB0 335 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 Q71RC1 249 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 BHLHA15Q7RTS1 189 aaPredicted RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 WFDC8Q8IUA0 241 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SLC37A3Q8NCC5 494 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 ST8SIA1Q92185 356 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 GGHQ92820 318 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 OSTF1Q92882 214 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 PHF21AQ96BD5 680 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 MUCL1Q96DR8 90 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 NEURL3Q96EH8 262 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 BOD1Q96IK1 185 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 WDFY2Q96P53 400 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 OR5M11Q96RB7 305 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SPATA5L1Q9BVQ7 753 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SLCO5A1Q9H2Y9 848 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 PIGUQ9H490 435 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 IKZF5Q9H5V7 419 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 TMEM38AQ9H6F2 299 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 ABCB9Q9NP78 766 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 DCAF13Q9NV06 445 aaKnown RBP5.31□□□□□ -1.56
PTPRR-204ENST00000440835 SDHAF2Q9NX18 166 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 CALML5Q9NZT1 146 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 UBQLN2Q9UHD9 624 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 FBN3Q75N90 2809 aa5.31□□□□□ -1.56
PTPRR-204ENST00000440835 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
PTPRR-204ENST00000440835 A0A1W2PPL8 197 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 F5H0A9 414 aaPredicted RBP5.3□□□□□ -1.56
PTPRR-204ENST00000440835 CHP2O43745 196 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 CXCL13O43927 109 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 ZNF682O95780 498 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 SERPINA1P01009 418 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 APOC1P02654 83 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 RAB4AP20338 218 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 COX5AP20674 150 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 MAP2K3P46734 347 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 NUDT6P53370 316 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 HSPB3Q12988 150 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 FCN2Q15485 313 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 SSX1Q16384 188 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 TSTQ16762 297 aaKnown RBP5.3□□□□□ -1.56
PTPRR-204ENST00000440835 SWI5Q1ZZU3 235 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 LGALSLQ3ZCW2 172 aaPredicted RBP5.3□□□□□ -1.56
PTPRR-204ENST00000440835 MFSD12Q6NUT3 480 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 FIGNL1Q6PIW4 674 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 DEGS2Q6QHC5 323 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 FCRLAQ7L513 359 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 TPRA1Q86W33 373 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 C17orf78Q8N4C9 275 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 MS4A15Q8N5U1 240 aa5.3□□□□□ -1.56
PTPRR-204ENST00000440835 NUP43Q8NFH3 380 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms